Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0609 ATGGAGCAAACGCCTCTTGTGGCTTCAATACTCAATGCAACTTTGTTGGTTGTTGCAATATTAGCTCTTATCCAAGGAGCACATGGAATTGGAATTGGTGTTAATTATGGCACAGTAGCAAACAACCTTCCTCCACCAGCCATGGTTGCAAAATTCCTATCAAAATCCACCACAATAAAAAAAGTGAGACTCTTCGACGCGAACCCTGAAATTCTACGCGCATTTGGCAACACCGGCATAGAGGTAACCATAACCGTCCCCAACGACCAAATCCCCGACATCACAAACTTAACCTACGCACAACAATGGGTCAAAACCAACGTCCAACCCTTCATCCCCGCGACCAAACTAATCCGAATCCTCGTAGGCAACGAAGTGTTGTCCACCGCCAACAAACTCCTCGTCAGCACCCTTGTACCCGCCATGCAAACCCTCCACGTGGCCCTCGTGGCAGCATCACTAGACGACAACATTAAAATCTCCACGCCACACTCGTTGGGCATTTTGTCAAACTCAAGCCCACCCTCCGCCGCCAAATTCAGACAAGGCTACGACACGCACGTGATCAAACCAATGCTTAACTTTCTCAAAGACGCAAATGCACCATTCATGGTTAACCCTTACCCTTTCTTCGGATGCACTTCCAGCAGCACCCTTGATTATGCACTCTTTCGAAGCAATTCAGGTGTCTTTGTTGTTGATGATAACACGAAGCTCCGATACACGAACATGTTGGATGCGCAACTTGACGCGGTTTATTCGGCGTTGAAGGTTTTGGGCTTTGAGGATGTTGAGATTGTTATTGCTGAAACGGGCTGGCCCTCGGTTTGTGACCCGGCCCAAGTTGGTGTTAACCCGAAGACTGCTTCTGAGTACAATGGGAATCTCATTAGACACGTCACTTCTGGAGCTGGAACACCTCTTATGCCGAATAGGACTTTTGATACCTACATATTTGCTTTATTTGATGAAAATTTAAAGCCTGGCCCAAGTTGTGAGAGGAACTTTGGGCTTTTTTGGCCCAATATGACTCCTGTTTATAACGTCCCCATAATAATGAGGAACAATGTAGCTGTCGTTGCTAATAGTCATTATAAAGTGTTTTTGTCAATCGTGATTGTGTTAAGCTTGATTTGTACATGGGTTTAA 1149 0.4578 MEQTPLVASILNATLLVVAILALIQGAHGIGIGVNYGTVANNLPPPAMVAKFLSKSTTIKKVRLFDANPEILRAFGNTGIEVTITVPNDQIPDITNLTYAQQWVKTNVQPFIPATKLIRILVGNEVLSTANKLLVSTLVPAMQTLHVALVAASLDDNIKISTPHSLGILSNSSPPSAAKFRQGYDTHVIKPMLNFLKDANAPFMVNPYPFFGCTSSSTLDYALFRSNSGVFVVDDNTKLRYTNMLDAQLDAVYSALKVLGFEDVEIVIAETGWPSVCDPAQVGVNPKTASEYNGNLIRHVTSGAGTPLMPNRTFDTYIFALFDENLKPGPSCERNFGLFWPNMTPVYNVPIIMRNNVAVVANSHYKVFLSIVIVLSLICTWV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0609 382 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 356 IPR044965 GO:0004553|GO:0005975
Gso6g0609 382 Pfam Glycosyl hydrolases family 17 32 349 IPR000490 GO:0004553|GO:0005975
Gso6g0609 382 SUPERFAMILY (Trans)glycosidases 32 349 IPR017853 -
Gso6g0609 382 Gene3D Glycosidases 31 357 - -
Gso6g0609 382 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 21 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0609 Gso-Chr6 5666455 5667845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0609 32 357 Miscellaneous Gene Families AT3G46570 55.793 7.01e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0609 - - gmx:100795377 749.969