Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0598 ATGTCCAAGGTTCGTCTTTTGAATTTCTCCCATGGCCTAATCCTCTCAACACTCTTCATCCACTACTCTCTAGCTGATGTTGGCACTGCTGCCCAATATGGCCCTCCCTTTTTGCCGACCACATGTTTCGGCAGAGACGCATCGCAGTTTCCGTCAAGTAACATGTTTGCTGCGGCCGGGGAGGGTATATGGGACAATGGTGCCGCGTGTGGGAGGCAGTATCAGGTGCGCTGCATCAGCGCTGCGGCACCCAGGACTTGTGTTCCTGGCCAGACGATTCAGATCAAGATTGTTGATCGAGCGCAATCATCGGTTTCTAGGCCTTCCCTAGGTGGAACTTCCATGGTCCTCTCCGTCACTGCCTTCCAGGCCATCGCCAATGTTTCTGCGTCATTCATTAACATTGAATTCCAGCAGGTTTGA 423 0.5248 MSKVRLLNFSHGLILSTLFIHYSLADVGTAAQYGPPFLPTTCFGRDASQFPSSNMFAAAGEGIWDNGAACGRQYQVRCISAAAPRTCVPGQTIQIKIVDRAQSSVSRPSLGGTSMVLSVTAFQAIANVSASFINIEFQQV* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0598 140 Pfam Lytic transglycolase 61 136 IPR009009 -
Gso6g0598 140 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 7 140 - -
Gso6g0598 140 Gene3D - 26 140 IPR036908 -
Gso6g0598 140 SUPERFAMILY Barwin-like endoglucanases 15 140 IPR036908 -
Gso6g0598 140 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 7 140 - -
Gso6g0598 140 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 140 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0598 Gso-Chr6 5519431 5521215 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0598 - - gmx:100803494 280.026