Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0581 ATGAAGCTCTTCCTCTTTGTAATCTTTTCTAGCCTATTGCTCAAACAATTGAGCCTTGTTGTTGGAGACGTTGGCACTGCTGCTTCTTATGGACCACCGTACATACCTACTGCTTGTGATGGGAATAGGCCAGGGCAGTTTCCTCCTGGAAATCTATTTGTTGCGGTGAATGAAGGGTTATGGGATAACGGGGCAGCGTGTGGAAGGAGATACAGAATAAGGTGTGTGAGTGGAAACAATAGGCCATGCAAAGGTGGTAGCATCGATGTTAAAGTGGTAGATTCCTGTTCAAGGTCACCATGTCCCAACACCCTCCTCATGTCAAATGATGCATTTGCAGCTATTGCACGCTTCCCTCATGTTAAAATCAATATTGAATATACCCAGATATGA 393 0.4453 MKLFLFVIFSSLLLKQLSLVVGDVGTAASYGPPYIPTACDGNRPGQFPPGNLFVAVNEGLWDNGAACGRRYRIRCVSGNNRPCKGGSIDVKVVDSCSRSPCPNTLLMSNDAFAAIARFPHVKINIEYTQI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0581 130 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 129 - -
Gso6g0581 130 Pfam Lytic transglycolase 55 127 IPR009009 -
Gso6g0581 130 Gene3D - 23 130 IPR036908 -
Gso6g0581 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 130 IPR007112 -
Gso6g0581 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 129 - -
Gso6g0581 130 SUPERFAMILY Barwin-like endoglucanases 21 130 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0581 Gso-Chr6 5382894 5384221 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0581 - - gmx:100792215 262.307