Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0576 ATGGACTTAGAAGGAAGTGAAAAGGATTCAGTGGTTACTCAGATTAGCATTGGCGGATTTGGCGGTGAGGTCAAAGCAAGTGATCTCGTGAATTACTTGGAGGATAAAATTGGACTTGTGTACAGGTGTAGGTTGAAGACTTCTTGGACCCCTCCAGAGTCATATCCAGAATTTAATATCATTGATACTGCAAATATTAGAAGAACGGATAACTATAAGAAGGTGGAGCCCCATGCCTTTGTGCATTTTGCATCTCCGGAATCTGTGACTGCAGCCCTGAATGCTTCAGGTTGTTGTGATCTATTTTTGAAGAATCAACCCTTAAAGGTCAGCTGTGGGCCTGAAAATCCATACTTCCTGAACCAAAGGAGGAGAACTACAACTCCTTTTAAGATGTCTGATGTACTTGTTGAAATTGGGACTTTGGTTAGCCCAGGGGAGTTTTTTGTTTCTTGGAGAGGACCTGATAAAGGTGTAAAATTTCTTGTGGATCCCTTTGATGGCATGTGCAGGTTTTGTTTCAGTAGGGATACTGCATTCTCATTCAAAGGGATAGAAAAAAAAGCAGTGATAAAGTGTGATTTTCAGGTGGGATTCCTGGTTAGAGACATTAATGAGATCAAGAGATATAATGATACATCATATCTCGTTGTTTTATTGCACCTAGCTTCTTCACCTTGGGTTTGGTACAGAACTGCCGATGATGACATTGAAGAATCAGTACCATTTGATTTGCTAGATGATGATGATCCTTGGATTAGAACCACTGATTTTACTCCCAGTGGGGCAATTGGTCGATGCAATTTTTATAGAATTTCAATCCCACCTCGCCATGGTGCGAAATTGATGAAGGCCATGCTTTATCTGAAAGGTCAAAGAGTGCAAATGCAAGAACTTGCACTTAAACAGACACTTAGGACACTGAATGAACCTGATTTTGGTGTGCCCATGTCAGATGCTTTCTTCTATATACATTTTCAGAAGGACATTGCTTTTGACATAATGTTTTTGGTCAATGCTATTGTACATAAAGGCATATTCAATCAGCACAGGTTGTCGGATAGGTTTTTTGAATTGCTGAAAAATCAACCTAAGGAGCTCAATGTGGCTGCCCTGAAGCATTTATGTTCTTACAAGCGCCCAGTATTTGATGCAACTAAGAGGCTAAAAATAGTCCAAGAATGGTTGCTCAGAAATCCTAAACTTTATCAGATCTCTAAACAGTTGGATGATATTGTTGAGGTTAGAAGATTGGTTATTACTCCATCAAAAGCCTATTGTATACCGCCTGAAGTTGAATTGTCCAACAGGGTTCTCAGAAAATTCAGAGAAGTTTCAGATTGTTTCTTGAGAGTCACCTTTATGGATGAAGGCATGCAAACAATTAATGTGAATGCTCTTAACTATTATGTTGCTCCTATAGTGAAGGAAATCACATCGAATTCTTTCTCTCAAAGGACAAAAATATATAAAAGGGTCAAGACTATCTTGGAACAGGGATTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCCTTTTCATCCAATCAACTTAGAGATAGATCTGCTTGGTTTTTTGCTGAAGACAAAATAAGATGTGATGATATACGAAATTGGATGGGCAAGTTTAATCAGAGGAATGTTGCAAAATGTGCTGCTAGGATGGGACAATGCTTCTCGTCTACTTATGCAACAGTTGAAGTTGCTGCAAATGAAGTTAACTCCATGCTACCTGATGTTGAGAGGAACAATTACATTTTCTCTGATGGTATTGGTGTTATCACTCATGATCTTGCAAGGGAAGTTGCAGAAAAGTTGAAGTTGGACAATGTACCCTCTGCTTACCAGATCAGATATGCTGGTTTTAAAGGGGTTGTGGCCTCTTGGCCGGCCAAAGGGGATGGGGTCAGACTTTCTTTGAGGCCTAGTATGAACAAGTTTCAATCTACTCATAATATCTTGGAGATCTGTGCTTGGACCAGGTTTCAGCCTGGTTTTCTTAACCGGCAGATTATAACATTGCTTTCAGCACTGGGTGTGCCTGATGAAGTATTTTGGCAAATGCAGGAGGCAATGCTTTTGAAGTTAAATCAAATGCTTGTGGATGCAGATATTGCTTTCGATGTTCTTACCAAATCATGTGCTGAGCATGGGAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCCCTAACAGAACCTCATCTTAGAGGAATGCTAACTTCTACACGTGCTGCGCAGCTTTGGGGACTTAGAGAAAAGTCCAGGATTTTTGTATCGTCTGGGAGATGGTTGATGGGTGTCTTAGATGAGTCGGGCGTGCTTGAACAAGGGCAGTGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCAAAGCATGGTTCAAGATTTTCAGAGACAAAGAACCTGCATGTAGTTAAAGGTTTTGTGATTATAGCAAAAAATCCTTGCCTTCATCCAGGAGATGTAAGAGTTTTGGAGGCAGTTGATGCCCCCGATTTACATCATTTAAATGATTGTCTTGTTTTCCCTCAAAAGGGTGACAGACCCCATACAAATGAAGCTTCTGGAAGTGACCTTGACGGGGATTTATATTTTGTCACATGGGATGAAAATCTCATTCCACCAAGTAAGAGGAGCTGGATACCTATGGAGTATGCCCCTCAAGAAAGCAAACTTAAGACACGTCAAGTGATGACCCGAGACATCATAGAATTTTTTGTCAGAAGCATGGTAAATGAACATTTGGGTGCAATCTGCCATGCACATGTGGTACATGCCGATTCCAGTGACTACGGTGCCTTGGATGAGAAATGCATACACTTGGCCGAGCTAGCAGCCACTGCTGTTGATTTTCCAAAGACCGGGAAGCTTGTCACTATGCCTCCTCATCTGAAACCAAAATTGTACCCTGATTTCATGGGGAAAGAGCGGCACCAGTCTTACAGGTCGAAGAAAATCCTGGGTAGACTTTACCGGCGTATCAAAGATGCTTATGATGAAGATATTGATGCTCCCTATTTGAACTTTGTGACTGGCGATATACCGTATGATAAAGATCTTGAAGTTCCAGGATCTGCTGATTTTATTGCTGATGCGTGGGAGCAAAAATGCTCATATGATGGCCAATTGAGTGGGCTACTTGGACAATACAAAGTGAAAAGAGAAGAGGAAGTTGTTACTGGACAGATTTGGTCTATGCCAAAATACAACAGTAGGAAGCAAGGGGAGCTTAAAGAGAGGCTGAAGCACTCTTACAGTGCCCTGAAAAAAGAATTTAGGCACACTTTTGAGAAATTGAATTCAGATGTTGGAGAATTAAGCGAGGAAGAAAAAAATTTGTTCTATGAGCAGAAAGCTTCGGCCTGGTATCAGGTGACATATCATCCTGAGTGGGTGAAAAAATCCCTTGATCTGCAAGATAAATCCTCAGAGAACCAAGAGGCTGATAGTTTGGGAAGTACGGTGATGTTGAGTTTTCCTTGGATTGCAGTTGATTACCTAGCTCGCACAAAGATAAGGCAACGACATCAGAGATGTGGAAATTTTGACTCAACTAAGCCAGTTGATTCTCTGGCAAAGTATCTATCTGAAAGGTTATAA 3615 0.4077 MDLEGSEKDSVVTQISIGGFGGEVKASDLVNYLEDKIGLVYRCRLKTSWTPPESYPEFNIIDTANIRRTDNYKKVEPHAFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPENPYFLNQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTAFSFKGIEKKAVIKCDFQVGFLVRDINEIKRYNDTSYLVVLLHLASSPWVWYRTADDDIEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMLYLKGQRVQMQELALKQTLRTLNEPDFGVPMSDAFFYIHFQKDIAFDIMFLVNAIVHKGIFNQHRLSDRFFELLKNQPKELNVAALKHLCSYKRPVFDATKRLKIVQEWLLRNPKLYQISKQLDDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEITSNSFSQRTKIYKRVKTILEQGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDKIRCDDIRNWMGKFNQRNVAKCAARMGQCFSSTYATVEVAANEVNSMLPDVERNNYIFSDGIGVITHDLAREVAEKLKLDNVPSAYQIRYAGFKGVVASWPAKGDGVRLSLRPSMNKFQSTHNILEICAWTRFQPGFLNRQIITLLSALGVPDEVFWQMQEAMLLKLNQMLVDADIAFDVLTKSCAEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKNLHVVKGFVIIAKNPCLHPGDVRVLEAVDAPDLHHLNDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAPQESKLKTRQVMTRDIIEFFVRSMVNEHLGAICHAHVVHADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLAKYLSERL* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0576 1204 CDD RRM_SF 15 111 - -
Gso6g0576 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 6 7 1203 - -
Gso6g0576 1204 Pfam RNA dependent RNA polymerase 420 999 IPR007855 GO:0003968
Gso6g0576 1204 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1203 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0576 Gso-Chr6 5340677 5346833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0576 K11699 - gmx:100795178 2451.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0577 4 5596302 5602329 Gso6g0576 6 5340677 5346833 GST