Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0546 ATGTTGTTAAATTACAGACCACTTCATTTTGTTTTCCTGCTCACATTTTTCTTGTCCGCTTCCTGTCTCTTGTCACACCAGGCTTCAGGGACAGAAAACGAGGGAAAAAACGTTGTTGGCCTTTCTCGGTTGTATGTATTTGCTGCTGCACCGTTCGAGAGCTCGCCCTTTCCCTTAGCTGCTGAGAGAACACGAAGAAAAGACCCTCTTGATGGCTTCAATAAGTACATTTATGGATGGAATATCACTAGCAGTGATTATTGGGCTTCTGTGGCATATACCGCAGCTCCTTTGTTCAGTATTGCAGCAGTCTGGTTCTTGGGCTTTGGCTTATGCTTAGTGATCATCGGTGTTTGTTACTTCTGTCATAAAAGAGAGCCATATGGTTATTCACCAACATGCTATGCCCTTTCCCTTATTCTCCTGATATTATTCACATTTACAGCATTGATTGGATGTGCAGTTCTCTACATTGGCCAAGGAAGTTTTCATCATAGCATGACACATACATTGCAGTATGTGGTACATCAAGCTGATTCTACTGTGGATAAGCTTAGGAACGTGTCAGATTATCTTGCTCAAGCTAAGCAGGTTGGAATCGATCGAGTTTTTCTCCCCACAAATGTTCAAACTGATATTGATCAAGCAGAAACAGATATCAATAACTCTGCTAGCACCCTTGCTGATAAGACAAAGGAGAACTCAGACAACATACAAGATCTCTTAGATTCTGCGAGGCTAGCACTTATCATAATAGCTGCTGTCATGCTAGTCTTGACATTTCTTGGATTTTTATTCTCGATTTTTGGCATACAGCTCCTTGTGTACATCTTGGTAATCGCAGGATGGGTTCTTGTTACTGGCACCCTTATATTATGTGGCCTGTTCCTTGTTCTCCATAATGCGACAGCAGACAGTTGTATAGCTGTGAATGAGTGGATCCAGTATCCGACTGCACATACGGCTATGGACGATATTCTGCCCTGTGTGGACAATGCCACTGCACAAGAAACATTGTCACGAAGCAAAGAAGTAACTTCTGAACTAGTCAATTTGGTCAACCAAGTTATCACCAATGTCTCCAACTTAAATTTTGCCCCCAATTTCACTCCACTCTACTACAATCAATCTGGTCCCCTCATGCCACTCCTCTGTAATCCCTTCCATCCTGACATGACGGATAGACAATGTGATGCTGGTGAAGTCACCCTAAGCAATGCAACACAGGTGTATGGCAATTTTGTGTGCCAGGTTTCACCATCTGAGATATGCATGACACAGGGGCGTTTGACCCCTACCTTCTACAACCAAATATCTGCTGGAATAAACGTGGGCAACGCCTTGTATGATTATGCTCCGTCCCTCATTGAGCTACAAGATTGCACCTTCGTTCGAGAAACTCTAAGCGACATATCCAGGGACCATTGTCCTGGTTTACAGCGTTATAGTAGATGGATCTATATTGGATTGGTAATGGTCTCTTTTGCCGTCATGTTCTCATTGATCTTCTGGATCGTGTATGGGAGAGAGAGGAGACATCGTCTATATAGAAAAGAGTCAAAGGACTTCACTCCTACACATGCACCAGCACCAGCACCAGGACAAGCATTAGCATTGGCCCAGATCCCTGAAGGATAA 1638 0.4347 MLLNYRPLHFVFLLTFFLSASCLLSHQASGTENEGKNVVGLSRLYVFAAAPFESSPFPLAAERTRRKDPLDGFNKYIYGWNITSSDYWASVAYTAAPLFSIAAVWFLGFGLCLVIIGVCYFCHKREPYGYSPTCYALSLILLILFTFTALIGCAVLYIGQGSFHHSMTHTLQYVVHQADSTVDKLRNVSDYLAQAKQVGIDRVFLPTNVQTDIDQAETDINNSASTLADKTKENSDNIQDLLDSARLALIIIAAVMLVLTFLGFLFSIFGIQLLVYILVIAGWVLVTGTLILCGLFLVLHNATADSCIAVNEWIQYPTAHTAMDDILPCVDNATAQETLSRSKEVTSELVNLVNQVITNVSNLNFAPNFTPLYYNQSGPLMPLLCNPFHPDMTDRQCDAGEVTLSNATQVYGNFVCQVSPSEICMTQGRLTPTFYNQISAGINVGNALYDYAPSLIELQDCTFVRETLSDISRDHCPGLQRYSRWIYIGLVMVSFAVMFSLIFWIVYGRERRHRLYRKESKDFTPTHAPAPAPGQALALAQIPEG* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0546 545 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gso6g0546 545 PANTHER TRANSMEMBRANE PROTEIN 1 520 - -
Gso6g0546 545 Coils Coil 213 233 - -
Gso6g0546 545 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 1 520 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0546 Gso-Chr6 5075579 5080608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0546 - - gmx:100816139 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0551 4 5336421 5341786 Gso6g0546 6 5075579 5080608 GST