Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0524 ATGGCTCTCGGATTCTTCGCCCTCGCTCTCTTCCTCTTCATCACTTTCGACTCTGACATCGCTCCTTCTTCCACCGCATCCGCCGCTTCCTCCGAAGGCGTCGAGGTGCAGGTTACTTACGGCACGGTTCTGAAGCTTATGCACGAGAAGACCAAATTTCGGTTGCATTCTCATGACGTGCCCTACGGTTCTGGCAGTGGACAACAATCGGTTACTGGTTTCCCCAGTGTTGACGATTCCAATAGTTATTGGATTGTAAGACCTGAGCCAGGAACTTCTGCTAAACAAGGTGACCCCATTAAAAGTGGCACAATCATTAGATTGCAGCACATGAGGACAAGGAAGTGGCTGCACAGCCACTTGCATGCATCCCCGATATCAGGCAATCTTGAGGTAAGTTGTTTTGGAGGAGAATCCGAATCTGACACCGGGGACTATTGGAAGCTTATAATAGAAGGAAGTGGAAAGACTTGGAAGCAGGATCAGAAAATTCGCCTTCAGCATATTGACACTGGAGGCTATCTACATAGTCATGATAAGAAATACAGTCGTATTGCTGGGGGACAGCAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCAGCCGAAGGTGTCTACCTTCCCGTTACGGAAAGCAAATGA 657 0.4871 MALGFFALALFLFITFDSDIAPSSTASAASSEGVEVQVTYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPSVDDSNSYWIVRPEPGTSAKQGDPIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWKLIIEGSGKTWKQDQKIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0524 218 ProSiteProfiles MIR domain profile. 35 89 IPR016093 -
Gso6g0524 218 Pfam MIR domain 69 202 IPR016093 -
Gso6g0524 218 SUPERFAMILY MIR domain 36 209 IPR036300 -
Gso6g0524 218 Gene3D - 21 218 - -
Gso6g0524 218 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 218 - -
Gso6g0524 218 ProSiteProfiles MIR domain profile. 97 152 IPR016093 -
Gso6g0524 218 ProSiteProfiles MIR domain profile. 155 209 IPR016093 -
Gso6g0524 218 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 218 - -
Gso6g0524 218 SMART mir_2 35 89 IPR016093 -
Gso6g0524 218 SMART mir_2 155 209 IPR016093 -
Gso6g0524 218 SMART mir_2 97 152 IPR016093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0524 Gso-Chr6 4815851 4819968 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0524 - - gsj:114414928 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0528 4 5068329 5072051 Gso6g0524 6 4815851 4819968 GST