Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0521 ATGACAATGGGGTCCACCGATAAAGAATTGGAAGAGCAGCTTCTCGACGCCGGTAACAAGCTCCTCCTAGATCCTCCCTCCTCAGCGGAGGAGCTCCTCCCACTCCTCGACCAAGTAGAGTGTTGCCTATCGAGGGTTGAGCAGTCCCCTATTGACTCTATGCAAAATGCACTCTCTCCATCATTGAAAGCATTGATTGCGGACAAACTTTTAAGCCACTCAGATGATGATGTCAAAGTTGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGCTCAAATGAAGGATGTCTTTCAATTAATTGTATCTTCATTTGAAAATCTACATGATAAGTTAAGCCAATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCGAAAGTTAGATCATGTGTGGTAATGCTGGACCTTGAATGTGATACCCTGATTTTGGAGATGTTTCAGCATTTCTTTAAAAATATAAGGGAACATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTGCTGTCTCCACTCCTGACCAGCATTAAGAAAGACAATAAGGAAGTTTTTCCAATAGCCCAGAAATTGGGGGAGAGGGTCATTGAAAGCTGTGCAACCAAGCTTAAACCCTACTTGGTTCAAGCAGTGAAATCCTTGGGTATATCTGTGGATGATTATAGTTCAGTACTTGCTTCAATATGCCAAGATACATCTGATGACTTGGAGAAAAATGATACATGTGTTACTAGTGAGCATGTGGAAGATAAGAGTGATTCAGCAAAACAATCACTAGAGGAGTCAACACATGTGGTTAACAAGGATTCAAGTGAAGTTACACCCTCTCAACCAGAAAATACTGATGTAAAGATATCTCCAAAGTTGGTCATGAGCAATGGTGTTGTAGAAGATAATGTTTTAGCTGACTCCAAGTCCATTAAAAAACAAGAGGATGCTGATTGTTCTAGTCACTCTGAAGGTTTGAATTTATCTGGTCATGAGGTGCATAATGATCTGGACACTGAAAAAGTTGACACTAGTAAACAAAAGCCAGAGCAAGCTACCAAGAGGCAGCGAAAGAAATCAAGCTCTTCAACTAAATCAGCAAAACCTTCCAAAGGTCAAGTTGCTGCTAACGAGAAGGAAACTGAGAAAATGCTTGACTTTGAAAGCAACAGCAAGAAAGTTCCCAGTTCCTCTCACGAGGACCATTCAGCTGAAGCAGCAGGACCTCCAGAGAATGACAATGGCATTGATGCTAAGATTTCATCACCAAAGGCATGCAATGATGAATCTGAAGTTGTTGCTTCTCCACCAAGTGAGAGCTTCTCTGATGAAAATCATTCGAAGAAAATTGGGCGAACAAAAAAGAAAGATGGGGATGCTGAGGGTGTTTCAAAGGTGTCTGAAGGAGCTAGTGATTCAGAAGCCAAACCTGTCAGGCGATCCGTGAAAAGGGCACTTGGTCAGAAGTCTGATGCGAAAAAAACTAATGTGGTGGATTCAGTAAAAAAAGGAAGTGGGACAGCAAATGATGCAGATGCTAAAAAGCACCCAGCCAAGAAATTAGATGAAAACAAAAAGGATCGTGATGGATCATCTTCAAGACAAATGGAGGACAAGAAAAAGGGCAGGTGGGGGAAGGCTAACTCTGAAGCAAATGTAGTAAAGTCATCTGCTATGGATGTGGACAAGGAAATGGTTTCTTCTCTGAGGTCTGGTACAAAGTCAACTAAAAATGAAAATTCAGAGGAGACTCCCAAGACAAATGTGAAAAGGAAACGCAGTTCAGGAAAAGAAAATGAATCTAATGCGAAGGAATATGGTCAAAACCTTGTTGGTTTACGGGTCAAAGTTTGGTGGCCTGATGATCGTGAGTTTTACAGAGGTGTTGTTGATTCCTTTGATTCTGCCAAAAAGAAGCACAAGGTCTTGTACGATGATGGTGATGAAGAAACATTAAATCTTGTGAAGGAGAAATGGAAGGTCATTGGAGCTGATGACTCAGATGCAGATGAGGAAGAACGAAGTGATCGTGCAAGTCTTGATGCTTCCACTGATATGACATGGCTATTTGTATCCCTCGTGAAGAAATTGGGCGATGTGCTGCATTGGTTTGATCTTTATCAATTACGAATGCCACCAAAGAAGAAAGGGAAAACAAGTGCTGTTGAGTCAACCAAGCAAGGAAAGATGGATGCTTCTTCCAGAAGCGGTGGAGCATCAGCATCCAATAGATCAAAGGGTGCATCCACGAAGTCTGGCCTGAAGTCCAAAGATGGCAACAAATCCAAAGATTCCAAGACTATTAGCAAACCTGAGGATGCAGTTAGTAGAAAATCTAAGGCCAGCATTCCTAAGAGTGGTAGCAGTAAATCTATTGTTACTGCTAAAAAAATTGGTAATAAATCCAAAAATACTGATAATTCAATTGAATCAAAGGATGATGACACTAGCACGCCCAAACCCTCTGCGAAGTCTAAGCAAGAAACTCCAAAAAGTGGAAAGTCTAAGCAAGAAACTCCAAAAAGTGGAAAGTTTAAGCAAGAAACTCCAAAAAGTGGAAAGTCCAAGCAAGAAACCCTGAAGACTGCCCTTTCGAAAGTAAAACCTCTCAAAAGTGGTGGAAAGACTGATGTTAATGGTAAGAACAAGGTGAAATCTGGTTCATCAAAGAGAAAATATTCTGAGAATGAGTACTCAGATGTTTGA 2772 0.4091 MTMGSTDKELEEQLLDAGNKLLLDPPSSAEELLPLLDQVECCLSRVEQSPIDSMQNALSPSLKALIADKLLSHSDDDVKVAVASCISEITRITAPEAPYDDAQMKDVFQLIVSSFENLHDKLSQSYAKRTSILETVAKVRSCVVMLDLECDTLILEMFQHFFKNIREHHPENVFSSMETIMTLVLEESEDISLDLLSPLLTSIKKDNKEVFPIAQKLGERVIESCATKLKPYLVQAVKSLGISVDDYSSVLASICQDTSDDLEKNDTCVTSEHVEDKSDSAKQSLEESTHVVNKDSSEVTPSQPENTDVKISPKLVMSNGVVEDNVLADSKSIKKQEDADCSSHSEGLNLSGHEVHNDLDTEKVDTSKQKPEQATKRQRKKSSSSTKSAKPSKGQVAANEKETEKMLDFESNSKKVPSSSHEDHSAEAAGPPENDNGIDAKISSPKACNDESEVVASPPSESFSDENHSKKIGRTKKKDGDAEGVSKVSEGASDSEAKPVRRSVKRALGQKSDAKKTNVVDSVKKGSGTANDADAKKHPAKKLDENKKDRDGSSSRQMEDKKKGRWGKANSEANVVKSSAMDVDKEMVSSLRSGTKSTKNENSEETPKTNVKRKRSSGKENESNAKEYGQNLVGLRVKVWWPDDREFYRGVVDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIGADDSDADEEERSDRASLDASTDMTWLFVSLVKKLGDVLHWFDLYQLRMPPKKKGKTSAVESTKQGKMDASSRSGGASASNRSKGASTKSGLKSKDGNKSKDSKTISKPEDAVSRKSKASIPKSGSSKSIVTAKKIGNKSKNTDNSIESKDDDTSTPKPSAKSKQETPKSGKSKQETPKSGKFKQETPKSGKSKQETLKTALSKVKPLKSGGKTDVNGKNKVKSGSSKRKYSENEYSDV* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0521 923 MobiDBLite consensus disorder prediction 294 313 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 530 568 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 494 520 - -
Gso6g0521 923 SUPERFAMILY Tudor/PWWP/MBT 631 673 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 778 801 - -
Gso6g0521 923 Pfam Sister chromatid cohesion protein PDS5 protein 31 235 - -
Gso6g0521 923 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 5 921 IPR039776 GO:0007064
Gso6g0521 923 MobiDBLite consensus disorder prediction 337 628 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 745 777 - -
Gso6g0521 923 SUPERFAMILY ARM repeat 48 251 IPR016024 -
Gso6g0521 923 MobiDBLite consensus disorder prediction 735 923 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 803 827 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 351 379 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 598 622 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 828 877 - -
Gso6g0521 923 SMART TUDOR_7 629 684 IPR002999 -
Gso6g0521 923 MobiDBLite consensus disorder prediction 464 485 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 269 293 - -
Gso6g0521 923 PANTHER TRANSCRIPTIONAL REGULATOR 5 921 - -
Gso6g0521 923 MobiDBLite consensus disorder prediction 397 429 - -
Gso6g0521 923 Gene3D - 624 678 - -
Gso6g0521 923 CDD TUDOR 634 676 IPR002999 -
Gso6g0521 923 MobiDBLite consensus disorder prediction 269 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0521 Gso-Chr6 4784055 4791615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0521 - - gmx:100781036 1694.48