Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0482 ATGGAATGTAATGATCAGCGTGTAAGTGTAAGCTTGAAGAGAAAATCACCAGAAAATGGAGATCATGTACTCTTCAACACCTTTTCTCTGGATGACCTTAATGAAGATCTCTTTGAAAGGATACTTTCATGGCTCCAAACTTCCACATTCTTTCGCCTCAATTCTGTGTGCAAAAGATGGAAATCAGTAGCTGCTTCTGCCAGTTTCAAGCTTGCCTGCTCTCACATTCCCTCAAGGGAACCTTGGTTTTTAATGGTTGCTCCCAACCTTAACCAATCTGTTATCTTTGACTCTGCTGAAAGCACTTGGAAGAGACTAAATCACCCCTCTCTTCTGCAAGAAGAATCTAACCAAGATTGCATGCCAGTTGCGGCTTCCGGGGGCTTGATTTGCTACCGTAAATCATCAGGAAACTTCATTGTAACCAACCCTGTGACTGGATCTTGTAGAGAACTCCCTCCACTGCAACTTGCCTCACAAAACCAACCACTCGATGCCATCGTGATGAGCACAAGTTCCAAAGACCAAATCTCCTTCAAAATTGTGCTAGTCTTTGGTGAACTTCCAAATCTCTTGTTTAAAGTGTACAATTCAGGTTCTAACTGTTGGGAGGGTGAGACTGCATTGAGGAGAAAGACTGAAGACAATTCCATGGAATATGATTCCACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGAATTGTTGTGGCAAGCAACATGCAGAGAAGCCCCTCCAAGCAATTTTCATCTGTTATTACTAATAAAAATGATCAAGAGATTGTGTATTTTCTTAGTTACTCAGGGAATGTAGTAGCTTGCAATTTGACATGCAAGTGCTTCTCTGAGTACCCCAGGTTGTTGCCTGTTTACAATGAGTATTCCATTGATGTTGTGGAGTGCAATGGGGAGATGCTAGTTGTTTTGCTATCAGAATTCTTGGAAACCACAACCCTTAGGGTGTGGAAATATGATGAGGCTAATAGAGGGTGGCATCAGATTGCAGCAATGCCTGCAGCAAATTCTCATGAGTGGTATGGGAAGAAAGCAGATATTAACTGTGTTGGTGCTGGTAACCAAATCTTCATATGCTTGAACTCCACTGAGCTATGCACTTATGTTATGTGTGATTTGGAGACCAACAAGTGGGTTGAATTGCCAAATTGTTGCATAAATGGACAAGTCATAGACTTTATGTCTGCCTTTTCATTTGAGCCTCGGATAGAGGCTTCAGTGTGA 1242 0.4211 MECNDQRVSVSLKRKSPENGDHVLFNTFSLDDLNEDLFERILSWLQTSTFFRLNSVCKRWKSVAASASFKLACSHIPSREPWFLMVAPNLNQSVIFDSAESTWKRLNHPSLLQEESNQDCMPVAASGGLICYRKSSGNFIVTNPVTGSCRELPPLQLASQNQPLDAIVMSTSSKDQISFKIVLVFGELPNLLFKVYNSGSNCWEGETALRRKTEDNSMEYDSTDDNVVYFLSKAGIVVASNMQRSPSKQFSSVITNKNDQEIVYFLSYSGNVVACNLTCKCFSEYPRLLPVYNEYSIDVVECNGEMLVVLLSEFLETTTLRVWKYDEANRGWHQIAAMPAANSHEWYGKKADINCVGAGNQIFICLNSTELCTYVMCDLETNKWVELPNCCINGQVIDFMSAFSFEPRIEASV* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0482 413 Gene3D - 25 70 - -
Gso6g0482 413 SUPERFAMILY F-box domain 27 85 IPR036047 GO:0005515
Gso6g0482 413 Gene3D - 83 406 IPR015915 GO:0005515
Gso6g0482 413 ProSiteProfiles F-box domain profile. 27 72 IPR001810 GO:0005515
Gso6g0482 413 Pfam F-box domain 30 65 IPR001810 GO:0005515
Gso6g0482 413 SUPERFAMILY Kelch motif 89 390 IPR015915 GO:0005515
Gso6g0482 413 PANTHER F-BOX/KELCH-REPEAT PROTEIN 22 413 - -
Gso6g0482 413 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 22 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0482 Gso-Chr6 4429478 4431865 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0482 - - gmx:100777105 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0496 4 4755083 4757453 Gso6g0482 6 4429478 4431865 GST