Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0480 ATGGCTAATGAACGTGATCTGTTCTCGGCGGAGATTGTGAACCGTGGAATTGAATCGTCAGGACCAAACGCTGGGTCGTTGACGTTTTCGGTGAGGGTGAGAAGGCGCTTACCGGATTTTCTTCAATCGGTGAACCTTAAGTACGTGAAATTGGGTTACCATTATCTGATAAACCATGGCATATACTTGTTCACCATACCGGTTCTTCTCGTGGTGTTTAGTGCTGAGGTTGGAAGCCTCAGCAAAGAGGACCTATGGAAGAAGCTTTGGGAAGACGCGCGTTACGACCTTGCTACGGTTCTTGCTTCCTTTGGGGTCTTCGTTTTCACCTTGTCTGTCTACTTCATGTCGAGGCCACGTCCCATTTACCTCATTGATTTTGCATGTTATAAACCCGATGATGAACTCAAGGTGTCAAGGGAGCAGTTGATGGAGGTAGCAAGAAAATCAGGCAAGTTCGACGAAGCGAGTCTGGAGTTCCAGAAGAGGATGCTGATGTCCTCCGGAATCGGCGACGAGACCTACATCCCGAAGGCCGTCGTGGCCTCCACGGAGAACACGGCGACAATGAAAGAGGGGCGCGGCGAGGCCTCCATGGTGATGTTCGGAGCCCTGGACGAGCTGTTCGAGAAAAGCCGCGTCCGACCAAAGGACGTGGGCGTCCTAGTAGTGAACTGCAGCATCTTCAACCCGACACCATCACTCTCAGCGATGATCATAAACCACTACAAGATGAGAGGGAACATTCTGAGCTACAACCTCGGCGGAATGGGGTGCAGCGCGGGGATCATTGGTGTGGACTTGGCCAAGGATATTCTCCAGGCGAACCCTAATAACTACGCGGTGGTGGTGAGCACGGAGATGGTGGGGTACAACTGGTACCAGGGGAAGGACAGGTCTATGCTTATCCCGAATAGCTTCTTCCGCATGGGGTGTTCTGCTGTTCTGCTTTCCAACCGTCGAAGGGACTATAGCCGCGCAAAGTACCGTCTTGAACACATTGTTCGCACGCATAAGGGTGCCGATGACCGCAGCTTCAGGTGTGTTTACCAAGAGGAAGATGAGCAAAAACTCAAGGGACTAAAGATCAGCAAAGACTTGATTGAGATTGGTGGTGATGCTCTAAAAACCAACATCACCACACTAGGACCCTTGGTGCTACCCTTTTCTGAGCAGCTTCTCTTCTTTGCCACCCTTGTGTGGAGGCACTTATTTGGCAGCAAAAATGGTGGGAATTCACCCTCAATGAAGAAGCCTTACATTCCTGACTACAAACTAGCTTTTGAGCACTTTTGTGTGCATGCTGCAAGCAAGACCATTCTTGATGAGCTTCAAAGGAACTTGGAACTGAGTGACAAGAACATCGAAGCGTCTAGAATGACGCTGCATCGCTTTGGCAACACCTCTAGCAGCAGCATTTGGTATGAGTTGGCTTACATGGAAGCAAAAGAGAGTGTTAGAAGAGGAGACCGTGTTTGGCAACTCGCATTTGGCTCTGGCTTCAAGTGCAACAGTGTGGTTTGGCGCGCCATGCGCCGAGTCACCAAGCCTTCTAGGAACCCTTGGCTTGATTGCATCAACAGATATCCTGCACCTCTCAACAACTGA 1608 0.5037 MANERDLFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLFTIPVLLVVFSAEVGSLSKEDLWKKLWEDARYDLATVLASFGVFVFTLSVYFMSRPRPIYLIDFACYKPDDELKVSREQLMEVARKSGKFDEASLEFQKRMLMSSGIGDETYIPKAVVASTENTATMKEGRGEASMVMFGALDELFEKSRVRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIGVDLAKDILQANPNNYAVVVSTEMVGYNWYQGKDRSMLIPNSFFRMGCSAVLLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQKLKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGSKNGGNSPSMKKPYIPDYKLAFEHFCVHAASKTILDELQRNLELSDKNIEASRMTLHRFGNTSSSSIWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVTKPSRNPWLDCINRYPAPLNN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0480 535 Coils Coil 441 461 - -
Gso6g0480 535 PANTHER 3-KETOACYL-COA SYNTHASE 10 4 531 - -
Gso6g0480 535 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 535 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso6g0480 535 CDD CHS_like 98 508 - -
Gso6g0480 535 SUPERFAMILY Thiolase-like 108 326 IPR016039 GO:0016746
Gso6g0480 535 Gene3D - 122 510 IPR016039 GO:0016746
Gso6g0480 535 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 429 509 IPR013747 -
Gso6g0480 535 Pfam FAE1/Type III polyketide synthase-like protein 114 403 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gso6g0480 535 PANTHER 3-KETOACYL-COA SYNTHASE 4 531 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gso6g0480 535 SUPERFAMILY Thiolase-like 332 510 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0480 Gso-Chr6 4404119 4409103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0480 2 533 Miscellaneous Gene Families AT2G26250 76.588 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0480 K15397 - gmx:100818799 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0493 4 4718136 4723517 Gso6g0480 6 4404119 4409103 GST