Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0477 ATGGAAGCAAAAGATAAGTGGTGCGTGGTGACCGGAGGTCGCGGCTTCGCTGCTCGGTCTTTGGTGGAAATGCTAATTCGTCACAAGGAGTACTGCGTTCGCATCGCCGATTTGGAAGTCAGCATTGTTCTCGAGCCCGCCGAGCAGTTAGGCCTTCTCGGCCAGGCCCTGCACTCTGGCCGAGCCCAATATGTCTCCCTCGATCTTCGCAACAAGGCCCAAGTTCTAAAAGCGTTGGAGGGAGTTGAGGTGGTGTTCCACATGGCTGCTCCAAACTCTTCCATTAACAACTACCAGCTTCATCATTCCGTCAATGTGCAAGGGACGAATAATGTCATCGATGCTTGCGTGGAGCTGAACGTGAAGCGTCTCGTTTACACTAGCTGTCTCGTTTACACCAGCTCTCCCAGCGTCTTCTTCGACGATGTTCATGGAATTCATAATGGAAACGAAACAATGCCTTATGCGCATTCGCCTAATGATCATTATTCAGCAACGAAAGCCGAGGCTGAGGCATTGGTTATTAAAGCTAATGGGACTAATGGGCTCCTAACGTGCTGCATACGCCCTAGCAGCATTTTTGGGCCTGGTGATAGGCTGTCGGTGCCTTCACTAGTTGATGCTGCCAGAAAAGGGGAATCTAAGTTTCTTATTGGTGATGGCAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGATCGAGCTCTAGCTTCAGAAGGACCGGTTTCAGAAAAAGCTGCGGGAGAGGCATATTTCATAACAAATATGGAGCCTATGAAATTCTGGGAGTTCGTGTCATTGGTAGTGGAAGGTCTTGGATATGAAAGGCCAAGGATAAAGATCCCCACCTTTGTTATCATGCCCATTGCACATTTGGTGGAGTGGATATATAAGCTGCTAGGCCCATATGGGATGAAGCTGCCTCAGTTAATTCCTTCGAGAATAAGACTCATATCTTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCGTAACACTACAGGAGGGTCTGCGAAGGACAATTGAATCATACACACACTTGAAGGCGGATAATGAACCTAAAACTAAAAGAGAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAGAGGTGTGAATAATCAACTATATCTGTCTAACTTCTTTGCTTGGTGA 1206 0.4668 MEAKDKWCVVTGGRGFAARSLVEMLIRHKEYCVRIADLEVSIVLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTNNVIDACVELNVKRLVYTSCLVYTSSPSVFFDDVHGIHNGNETMPYAHSPNDHYSATKAEAEALVIKANGTNGLLTCCIRPSSIFGPGDRLSVPSLVDAARKGESKFLIGDGNNVYDFTYVENVAHAHICADRALASEGPVSEKAAGEAYFITNMEPMKFWEFVSLVVEGLGYERPRIKIPTFVIMPIAHLVEWIYKLLGPYGMKLPQLIPSRIRLISCSRTFDCSKAKDRLGYAPIVTLQEGLRRTIESYTHLKADNEPKTKREGPSKASKYLGSGRGVNNQLYLSNFFAW* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0477 401 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 289 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gso6g0477 401 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 4 371 - -
Gso6g0477 401 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 371 - -
Gso6g0477 401 Gene3D - 1 364 - -
Gso6g0477 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 361 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0477 Gso-Chr6 4360639 4365398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0477 9 364 Lipid Metabolism Gene Families AT2G33630 31.830 3.66e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0477 K23558 - gmx:100815785 812.372