Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0473 ATGAACTTAACCAAGAAAGGACCCCTAACGGATGCAAAGCTATTAAGCCCAAACAAGGCAACTACTCTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCCCTCAGATCATCATCATTATCTGGAACTACCAGCTTGGTAGATGCAACAGCAAGGCTTACTGCTGCTGGAACTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCTGATGATGAGGTGCACCGATACTGGCGATGTCAGCTCCCGGATGATATTACCCCTGATTTCAAGGTCTTGGGAGAAGATGAGTCTCGAGTTCTTGATGATATTTCTTTAGCAGGTTTATCTATACATGATGACAATGAAGCCTCCAGGTTTCCTTCTTCTAAAGGAAGTAAATATATAATAAATGAGCAGGAGGAAATATCTCAACAGCATGCTAATGGCAATAGCTTGGCAGATAAATTAGGGTTTTCCAATTCAAGCTACAGGGAGGACCCATCTTCTGGAAGCTTTTTGAATGCTCTGGCAAAGCCTTGGGAGAGGCCAATTGGGAGTGCTGACCAGCGTATTAACAGTGGTCAAGAGGGCCTTACTTATGATGACAACTCTAGACATGGATACTTAAATGATATTTTGGCCGAAAATGCAATTGTGGATGATACTGATCTGAATCCTTTGGAGTTTTTAGCCTCCCTGTTCCCTGGTTTTGCAGCAGAAAGCCTTGCAGAAGCTTACTTTGCTAATAGATGTGATTTACATCTGACCACTGAGATGCTCAATCAGTTAGAGCTTCAAGTTGATGGTGGTTTCAATCAGAATCTGAATTCAAAGACTTTGTCTGCTCCCAATCTCAGTGCAATGGACTACCCTGCACTTACTTCACCAGATGGCCAGACTGCTTCAGTAGAATATGTGGTTGATAATGTGCAACAAAGTGGCAATCCTTACCGATCATATGACAGTGATGTGCTGCTTTTCAAATCTGTCTCTTCAGTTTCATCTAGGGGTGGTGCTATTGACTTTGCTTCAGCTGTTAGGAAGTTGGCTTCTCGGGATTCTGGTGGTATTTGGAAGTATGATAAAAATGGCTCTGGTGATGCTGCTATCGGCTCAAGTAGGAATTCGAATGTTCTGGCTAGTGGTTACAATGGTGGACAGGGGAGAGCACACTTTGGTGATCGGTTACAGAACCGTGGTTCAGCTCGGGCATTTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCAGAGTTGCGGGAAGAGGCTCGTGATCATGCATGCTTACGTAATGCATATTTTGAGCAGGCACAGCAAGCCTATCTTATTGGTAATAAAGCCCTAGCAAAGGAACTAAGTGCTAAAGGGCAACTGCACAACATGCATATGAAGGTTGCTCATGGAAAAGCTCAAGAATCCATTTACCTCCAGAGAAATCCAGTTGCTCCAGAGTTGCAGGGCGATGGAAGAGGAAATGAGAGGATAATAGACCTACACGGGTTGCACGCAAGTGAAGCCATTCATGTGCTGAAACATGAGTTGAGTGTGCTGAAAAGCACTGCCATAGCTGCCGAGCAGCGTCTGCAGGTTTATATTCTTGTGGGCACAGGTCATCATACCAGGGGTTCTCGCACTCCTGCAAGACTTCCAATAGCTGTACAGCGTTTTCTTCTTGAAGAGGGCATTGACTTCACGGAAACTCAGCCAGGCCTACTTCGTGTTGTGATATATTGA 1740 0.4402 MNLTKKGPLTDAKLLSPNKATTLNPNAAEFVPFALRSSSLSGTTSLVDATARLTAAGTLGKAVLDRSESSISNNSDDEVHRYWRCQLPDDITPDFKVLGEDESRVLDDISLAGLSIHDDNEASRFPSSKGSKYIINEQEEISQQHANGNSLADKLGFSNSSYREDPSSGSFLNALAKPWERPIGSADQRINSGQEGLTYDDNSRHGYLNDILAENAIVDDTDLNPLEFLASLFPGFAAESLAEAYFANRCDLHLTTEMLNQLELQVDGGFNQNLNSKTLSAPNLSAMDYPALTSPDGQTASVEYVVDNVQQSGNPYRSYDSDVLLFKSVSSVSSRGGAIDFASAVRKLASRDSGGIWKYDKNGSGDAAIGSSRNSNVLASGYNGGQGRAHFGDRLQNRGSARAFPVWLETGDAVANMYSELREEARDHACLRNAYFEQAQQAYLIGNKALAKELSAKGQLHNMHMKVAHGKAQESIYLQRNPVAPELQGDGRGNERIIDLHGLHASEAIHVLKHELSVLKSTAIAAEQRLQVYILVGTGHHTRGSRTPARLPIAVQRFLLEEGIDFTETQPGLLRVVIY* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0473 579 CDD CUE_CID7_like 223 265 IPR041806 -
Gso6g0473 579 Gene3D - 465 578 IPR036063 -
Gso6g0473 579 SMART SMR_2 495 579 IPR002625 -
Gso6g0473 579 Pfam Domain of unknown function (DUF1771) 418 481 IPR013899 -
Gso6g0473 579 SUPERFAMILY SMR domain-like 496 577 IPR036063 -
Gso6g0473 579 SMART DUF1771_2 417 482 IPR013899 -
Gso6g0473 579 ProSiteProfiles Smr domain profile. 498 579 IPR002625 -
Gso6g0473 579 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0473 Gso-Chr6 4326090 4331153 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0473 - - gmx:100814198 1118.99