Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0454 ATGGCTGTGTCCTCCACCACCGCCACAGTACGTATTCCTGCTAAGAACATTCCAAACCCTCAAGCGCCAAAAATTGGATTCTCAAGTACAATCGCTTTTACTGCGAAACCGCAAAGAAGATTATTACGCATCAGAAGCTCCTCAGCCGAAACCTCTGGCACAGAGGTAGATTCAAAGAGTTCCATTGAAGTTCCAGAAGAAACATCATCACTCATTTCTGCTCTCAACGTCGAAAAGATTCTCCGTGGCTTACCAATTACAGATGCAGATCATTATGGTAGGCTAGGTATTCCACGAGGATGTCCCTTTGAATTGGTGGGGGGTGCATATAATATCAAGGTTCAGGAATTGAAGAGTCAGAATTTAGAGGAGGATGAACTTGAGAAGAAATTGGAACTTCTCAAAGAATCATACACCATCCTGTCATCGGAGGAAGAAAGAAGAATATATGACTGGAGCTTGGCCAGAGCAGAAAATGCGGACAAATTCGTTTGGCCGTTCGAGGTTGACATAACACAGTCAAAAATTTCAGAAGAAGATCCTCCACAACTGGACCCCGAGGATGTCGGACCAACGAGAGTGGTTGGGTATTTCTTATTAGGATGGATAATGTTGTCTATTGTGTTATCTATTGCACTAAACTTGTAA 648 0.4306 MAVSSTTATVRIPAKNIPNPQAPKIGFSSTIAFTAKPQRRLLRIRSSSAETSGTEVDSKSSIEVPEETSSLISALNVEKILRGLPITDADHYGRLGIPRGCPFELVGGAYNIKVQELKSQNLEEDELEKKLELLKESYTILSSEEERRIYDWSLARAENADKFVWPFEVDITQSKISEEDPPQLDPEDVGPTRVVGYFLLGWIMLSIVLSIALNL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0454 215 SUPERFAMILY Chaperone J-domain 89 155 IPR036869 -
Gso6g0454 215 Coils Coil 117 144 - -
Gso6g0454 215 Gene3D DnaJ domain 86 163 IPR036869 -
Gso6g0454 215 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 215 IPR044199 GO:0009535|GO:0010598
Gso6g0454 215 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0454 Gso-Chr6 4185555 4186924 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0454 K23052 - gmx:100782990 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0474 4 4458726 4460265 Gso6g0454 6 4185555 4186924 GST