Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0449 ATGAAAGCATCCGCACTGCTTAACTTGAAATCTTTCACTCTCAGCCGCCATTCTCCCACTTCCAACTCCTTCTTCCCCCCCTTTCTTTGTCCATCCCACCCCCGCCACCGCCGAATCCACCACTCTCGAAATCCAATCATGTCTGCCACATCCGTCAACTCCGAACGAGCACGCGCCCCTCCCGCCATTCCCTTGCCCCCTCCCCCTCTCTCCAACTTCAAAATTGGCCTCTGTCAACTCTCCGTCAGCCCCGACAAAGACAGCAACATCGCCCACGCTCGCACCGCCATTCAGGATGCTGCATCAAAGGGCGCCCAGCTTGTTCTTTTGCCCGAAATTTGGAACAGTCCTTATTCCAACGATAGTTTTCCTGTCTACGCTGAGGATATTGACGCTGGTGCTTCTCCTTCCACTGCCATGCTATCTGAACTCTCTCGTCTCTTGAAAATCACCATAGTTGGTGGTTCCATTCCAGAACGCTCTGGAGGTCTCTTGTACAACACTTGCTGCGTCTTTGGCACCGACGGAAACCTACTAGCCAAGCACCGCAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACTTTTATTGAATCAAAAACTCTTACTGCTGGGGAGACTCCGACAATTGTGGACACAGAGGTTGGACGCATTGGCATAGGCATCTGTTATGACATTCGATTTCCAGAACTAGCAATGATATATGCTGCTAGAGGTGCTCACTTACTCTGCTACCCTGGGGCATTTAACATGACAACTGGACCATTACATTGGGAGTTATTGCAGAGGGCAAGGGCTACAGATAATCAGTTATATGTGGCTACCTGTTCACCTGCCCGGGATACTGGATCTGGTTATGTGGCTTGGGGCCACTCCACTCTTGTTGGACCATTTGGAGAAGTTCTGGCTACTACAGAACATGAGGAGGCAATCATCATAGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTGCCTGTAACTAAGCAAAGGCGAGGTGATCTTTACCAGTTGGTGGATTTTCAGAGGCTGAATTCTCAGTGA 1059 0.4901 MKASALLNLKSFTLSRHSPTSNSFFPPFLCPSHPRHRRIHHSRNPIMSATSVNSERARAPPAIPLPPPPLSNFKIGLCQLSVSPDKDSNIAHARTAIQDAASKGAQLVLLPEIWNSPYSNDSFPVYAEDIDAGASPSTAMLSELSRLLKITIVGGSIPERSGGLLYNTCCVFGTDGNLLAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDFQRLNSQ* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0449 352 PANTHER NITRILASE-RELATED 35 351 - -
Gso6g0449 352 Pfam Carbon-nitrogen hydrolase 75 323 IPR003010 GO:0006807
Gso6g0449 352 ProSitePatterns Uncharacterized protein family UPF0012 signature. 221 241 IPR001110 -
Gso6g0449 352 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 35 351 - -
Gso6g0449 352 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 73 320 IPR003010 GO:0006807
Gso6g0449 352 Gene3D - 71 346 IPR036526 -
Gso6g0449 352 CDD nit 74 337 IPR045254 GO:0016811
Gso6g0449 352 SUPERFAMILY Carbon-nitrogen hydrolase 70 336 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0449 Gso-Chr6 4144488 4148894 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0449 K13566 - gmx:100817195 669.077