Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0417 ATGGCGGATTCAGTGTCGGTGGACATGGAAGCCATCTCTCCTCCACCTGAGGAACATATAATAAGAACTCGTCATGGTCGTGTCTCCGTTGCTGTGTATGGGGACCAGGACAAGCCAGCGCTAATCACGTATCCTGATTTGGCTTTAAATTATGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCAGAAGCCTGTTCACTGCTGCTCCACAATTTCTGTATATATCATATTAGTCCACCTGGGCATGAGTTGGGAGCTGCTGCCATTGATCCAGATGATCCAATTCTTTCTGCTGATGACTTGGCTGATCAAATAGCTGAAGTTCTTAACTATTTTGGTCATAGTACAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTACCTTATTTGCTATGAAGTATAGACATCGTGTTCTTGGTTTGGTACTAGTTTCTCCTTTATGTAAAGCACCATCTTGGACTGAATGGTTGTACAACAAGGTCATGTCAAATTTACTCTACTTTTATGGCATGTGTGGGGTGGTAAAAGAAATATTGCTAAAGCGGTACTTTAGCAAGGAAGTTCGAGGCAGTGATTATTTGTCAGAGTCAGATGTAGTTCAAGCATGCCAAAGGTCATTGGATGAGAGGCAGAGTTTGAATGTGTGGCGGTTCCTTGAAGCAATTAATGGGAGATATGACATAAGTGAAGGATTGAGAAAATTACAGTGTCGTTCACTAATTTTTGTTGGGGATATGTCTCCTTTCCACGCTGAGGCTCTTCATATGACGTCCAAGTTGGATAGACGACTCAGTGCCCTAGTCGAGGTTCAAGCGTGTGGATCAATGGTAACAGAGGAGCAACCTCATGCCATGTTAATACCGATGGAGTATTTTCTCATGGGATATGGCTTGTACAGACCATCTAAGCTGAGTGTCAGCCCAAGAAGTCCCCTGAGTCCCTCTTGCATTTCTCCTGAGCTTTACTCTCCAGAGAGTATGGGTTTGAAATTGAAACCAATAAAGACACGGATTTCCGTGGAGATATAG 1035 0.4338 MADSVSVDMEAISPPPEEHIIRTRHGRVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEACSLLLHNFCIYHISPPGHELGAAAIDPDDPILSADDLADQIAEVLNYFGHSTVMCMGVTAGAYILTLFAMKYRHRVLGLVLVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEVRGSDYLSESDVVQACQRSLDERQSLNVWRFLEAINGRYDISEGLRKLQCRSLIFVGDMSPFHAEALHMTSKLDRRLSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISVEI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0417 344 SUPERFAMILY alpha/beta-Hydrolases 18 295 IPR029058 -
Gso6g0417 344 Gene3D alpha/beta hydrolase 13 297 IPR029058 -
Gso6g0417 344 PANTHER N-MYC DOWNSTREAM REGULATED 2 344 IPR004142 -
Gso6g0417 344 Pfam Ndr family 18 302 IPR004142 -
Gso6g0417 344 PANTHER PROTEIN NDL2 2 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0417 Gso-Chr6 3874831 3879168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0417 - - gmx:100804729 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0435 4 4119754 4123986 Gso6g0417 6 3874831 3879168 GST
Gso14g0826 14 9073293 9077799 Gso6g0417 6 3874831 3879168 PCT
Gso17g1951 17 38679321 38683847 Gso6g0417 6 3874831 3879168 PCT
Gso6g0417 6 3874831 3879168 Gso14g0826 14 9073293 9077799 PCT
Gso6g0417 6 3874831 3879168 Gso17g1951 17 38679321 38683847 PCT