Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0410 ATGGACCGTTTTCCGATCCTCTTTCTCGTCGCCACCCTCATCACCCTCGCCTCCGGTGCCCGCCACGATATTCTCCGGTTACCCTCCGAAGCTTCCAGGTTCTTCAAAGCACCTGCTAATGCCGATCAAAACGATGAGGGCACCAGGTGGGCCGTTTTAGTTGCCGGTTCCAATGGCTACTGGAATTACAGGCACCAGTCTGATGTTTGCCATGCATATCAACTACTGAGGAAAGGTGGTGTGAAAGAGGAAAATATTGTTGTATTTATGTATGATGACATTGCTTTCAATGAAGAGAACCCACGGCCTGGAGTCATTATTAACAGTCCACACGGAAATGATGTTTACAAGGGAGTTCCTAAGGATTACGTTGGTGAAGATGTTACTGTTGACAACTTTTTTGCTGCTATACTTGGAAATAAGTCAGCTCTTACTGGTGGCAGTGGGAAGGTTGTGGATAGTGGCCCCAATGATCATATATTTATATACTACTCTGATCATGGCGGTCCGGGAGTGCTAGGGATGCCTACTAATCCATACATGTATGCATCCGATCTGATTGAAGTCTTGAAGAAGAAGCATGCTTCTGGAACTTATAAAAGCCTAGTATTTTATCTAGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCAGAAGGTCTGAATATCTATGCAACAACAGCTTCAAATGCTGAAGAAAGCAGTTGGGGAACATATTGTCCTGGGGAGTATCCTAGTCCTCCCCCTGAATATGAAACCTGCCTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGATAGTGACATACACAATTTGCGAACAGAAACTTTACATCAACAATACGACTTGGTCAAAGAAAGGACTATGAATGGAAATTCAATCTATGGTTCCCACGTGATGCAGTATGGTGACATAGGGCTTAGCAAGAACAATCTTGTCTTATATTTGGGTACAAATCCTGCTAATGATAATTTTACTTTTGTGCATAAAAACTCATTGGTGCCACCTTCAAAAGCAGTCAACCAACGTGATGCAGATCTCATCCATTTCTGGGATAAGTTCCGCAAAGCTCCTGTGGGTTCTTCTAGGAAAGCTGCAGCTGAGAAAGAAATTCTGGAAGCAATGTCTCACAGAATGCATATAGATGACAACATGAAACTTATTGGAAAGCTCTTATTTGGCATTGAAAAGGGTCCAGAACTGCTTAGCAGTGTTAGACCTGCTGGGCAACCACTTGTTGATGACTGGGACTGCCTTAAAACACTGGTTAGGACTTTTGAGACACATTGTGGATCTCTGTCTCAGTATGGGATGAAACATATGAGGTCCTTTGCAAACTTCTGCAACGCTGGAATACGGAAAGAGCAAATGGCTGAGGCCTCGGCACAAGCATGTGTCAGTATCCCTGCAAGTTCCTGGAGTTCTCTGCACAGGGGTTTCAGTGCATAA 1455 0.4419 MDRFPILFLVATLITLASGARHDILRLPSEASRFFKAPANADQNDEGTRWAVLVAGSNGYWNYRHQSDVCHAYQLLRKGGVKEENIVVFMYDDIAFNEENPRPGVIINSPHGNDVYKGVPKDYVGEDVTVDNFFAAILGNKSALTGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTNPYMYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYDLVKERTMNGNSIYGSHVMQYGDIGLSKNNLVLYLGTNPANDNFTFVHKNSLVPPSKAVNQRDADLIHFWDKFRKAPVGSSRKAAAEKEILEAMSHRMHIDDNMKLIGKLLFGIEKGPELLSSVRPAGQPLVDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIRKEQMAEASAQACVSIPASSWSSLHRGFSA* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0410 484 PIRSF Legumain 2 484 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 PRINTS Hemoglobinase (C13) cysteine protease signature 50 74 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 PRINTS Hemoglobinase (C13) cysteine protease signature 75 104 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 PRINTS Hemoglobinase (C13) cysteine protease signature 122 137 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 PRINTS Hemoglobinase (C13) cysteine protease signature 150 169 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 PRINTS Hemoglobinase (C13) cysteine protease signature 199 215 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 Gene3D - 344 472 IPR046427 -
Gso6g0410 484 Gene3D - 47 343 - -
Gso6g0410 484 PANTHER VACUOLAR-PROCESSING ENZYME 6 483 - -
Gso6g0410 484 Pfam Peptidase C13 family 49 319 IPR001096 GO:0006508|GO:0008233
Gso6g0410 484 PIRSF AE 3 484 IPR043577 GO:0004197|GO:0051603
Gso6g0410 484 PANTHER HEMOGLOBINASE FAMILY MEMBER 6 483 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0410 Gso-Chr6 3834863 3840033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0410 K01369 - gmx:100791675 981.859