Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0408 ATGTGGGTGCGATTTATATTAATTAACGGAGAAATGGAGAGAAAATATCAAAGTGGAATGGGAAAAACTAAGGTTGCAATCTTGTTGCTTTGGGTCTTGTGTATCAAATTGCAGTTGAATGTTGAAGCAAGAACATCATCAGCTTTAGAAACAGAAATCGAAGCCAAATTGAAGCAACTCAACAAGCCTGCCGTGAAAACCATTAAGAGTGAAGATGGAGATATTATTGATTGCGTCAACATCTACGATCAACCTGCTTTTGATCATCCAGCCTTAAAAAACCACACTATTAAGATGATGCCCGATTTTTTGCTAGAATCCCAAAATCCAAGCACAGAAGATGCTTCTGAGTCAGTGATATTTCAGACATGGCAAAAAAGTGGAAGCTGTCCAAAAGGAACCATTCCTATTCGCAGAATTCTAAAGGAAGACTTACTCAGAGCTTCTTCTCTTGGCCGATTTGGGCAGAAACCCCCAGCTTCTCTCAATTTTTCCAATGCCGACAGTGAATTTATTCCTGTAAATCGCTCGTCATCATATCTTGTGACATTGGGATACAATTATATCGGTGCAGAAGCAGACATCAACGTTTGGAATCCAAAGGTTACCATGCCAAACGATTTCACCACAGCTCAAATCTGGCTTAAGAACAACAACGGTGAAGTTTTTGAAAGTGTAGAATCAGGTTGGATGGTGAATCCAAAGTTATATCATGACGGAGCCACCCGGTTTTTTGTCTCCTGGACTAGGGATTCATACAGGTCAATAGGTTGCTTTGATCTTACTTGTCCAGGATTTGTGCAAACAGGCCAAGTAGCCCTTGGTGCTAGCATAGGACCTATATCATCCATTATGGGCCCACAGTATGAGCTTAACGTTGGACTGTTCCTGGAACCAGACTCAGGAAATTGGTATCTTAAAATTAAGAACAACGTCCCAGTGGGTTATTGGCCGGCTGAAATATTGGGTTCTTTAACGCACAGTGCCATATTGGTTGAATGGGGTGGACAAGTATCAAGCACAAATATAAAGAATCATGAAAGCCCTCACACGGGAACAGAAATGGGAAGTGGACATGCCGCAAGTGGTCGATTTCAGAACGCGTGCTTCATGCGCAATGTGAGGATTAAGGATTATTCGCTACAGCTTAAGTATCCTGAGCATGCATATGCTATGGCTGAAGAGCCCTACTGTTACAGCTCCCTCAACGACGTCCATTATGGGAAGGAACCTGTCTTTTATTTTGGAGGACCCGGACGAAACCCACCCTTTTGTCCTTAA 1281 0.4239 MWVRFILINGEMERKYQSGMGKTKVAILLLWVLCIKLQLNVEARTSSALETEIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYDQPAFDHPALKNHTIKMMPDFLLESQNPSTEDASESVIFQTWQKSGSCPKGTIPIRRILKEDLLRASSLGRFGQKPPASLNFSNADSEFIPVNRSSSYLVTLGYNYIGAEADINVWNPKVTMPNDFTTAQIWLKNNNGEVFESVESGWMVNPKLYHDGATRFFVSWTRDSYRSIGCFDLTCPGFVQTGQVALGASIGPISSIMGPQYELNVGLFLEPDSGNWYLKIKNNVPVGYWPAEILGSLTHSAILVEWGGQVSSTNIKNHESPHTGTEMGSGHAASGRFQNACFMRNVRIKDYSLQLKYPEHAYAMAEEPYCYSSLNDVHYGKEPVFYFGGPGRNPPFCP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0408 426 PANTHER ASLB (DUF239)-RELATED 33 422 - -
Gso6g0408 426 Pfam Neprosin activation peptide 67 168 IPR025521 -
Gso6g0408 426 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 33 422 - -
Gso6g0408 426 Pfam Neprosin 206 418 IPR004314 -
Gso6g0408 426 Gene3D - 195 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0408 Gso-Chr6 3817799 3821074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0408 - - gmx:100804570 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1961 17 38800612 38804459 Gso6g0408 6 3817799 3821074 PCT
Gso6g0408 6 3817799 3821074 Gso17g1961 17 38800612 38804459 PCT