Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0279 ATGGAGTCCGAACTCAAAGACCTCAATTCGAAGCCACCCAACTGCAACGGCAACGCCAACAGCGTTTGCGACGACCGTCCTCTGCTGAAGCCGGAGCCTCCGGCCTCCTCCGACAGCATCGCCGAGATGGAGAAGAAGTTCGCCGCGTACGTCCGCCGCGACGTGTACGGCACCATGGGACGCGGCGAGTTGCCAGCGAAGGAGAAGCTCTTGCTCGGCTTCGCGTTGGTCACTCTCCTCCCCATTCGAGTCGTTCTCGCCGTCACCATATTGCTCTTCTATTACTTAATTTGTAGGGTTTGCACTCTCTTCTCTGCTCCGACCGGCGAGGAGGAACAGGAAGATTACGCTCATATGAGTGGGTTGAGGAGAACCGTCATTGTTTCGTGTGGACGCGCCCTCTCCAGAGTCATGCTCTTCATTTTCGGCTTTTATTGGATCCCCGAATCCAACTCTGCCTCTCAGGAAGACCGGAGTCAGCCTGAAGAGTTGGGGAGACCTAGCGTAATAATATCTAATCATGTGTCATACTTGGATATTTTGTATCACATGTCGTCCTCATTCCCAAGTTTTGTTGCTAAGAGATCAGTGGCTAAACTTCCGCTCATTGGTCTCATCAGCAAGTGCCTTGGTTGTGTGTATGTTCAGCGGGAATCAAAGTCATCGGACTTCAAGGGTGTTTCAGCTGTTGTCACTGACAGAATTCAAGAAGCTCATCAGAATGAGTCTGCTCCATTAATGATGTTATTTCCAGAAGGAACAACCACAAATGGAGAGTTCCTCCTTCCATTCAAGACTGGTGGTTTTTTGGCAAAGGCACCAGTACTTCCTGTGATTTTAAGATATCATTACCAGAGATTTAGCCCCGCCTGGGATTCCATATCTGGGGTGCGCCATGTAATATTTCTCCTGTGTCAGTTTGTGAATTATATGGAGGTGATCCGAGTACCTGTTTACCATCCCTCACAGCAGGAGATGAATGATCCCAAACTATATGCTAATAATGTTAGAAGGTTGATGGCTACTGAGGGTAATTTGATACTTTCTGATATTGGGTTAGCTGAAAAACGAATATATCACGCTGCTCTCAATGGTTTGTTTTCCCAATGCTAA 1113 0.4816 MESELKDLNSKPPNCNGNANSVCDDRPLLKPEPPASSDSIAEMEKKFAAYVRRDVYGTMGRGELPAKEKLLLGFALVTLLPIRVVLAVTILLFYYLICRVCTLFSAPTGEEEQEDYAHMSGLRRTVIVSCGRALSRVMLFIFGFYWIPESNSASQEDRSQPEELGRPSVIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLIGLISKCLGCVYVQRESKSSDFKGVSAVVTDRIQEAHQNESAPLMMLFPEGTTTNGEFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVIRVPVYHPSQQEMNDPKLYANNVRRLMATEGNLILSDIGLAEKRIYHAALNGLFSQC* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0279 370 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 116 350 - -
Gso6g0279 370 SMART plsc_2 168 283 IPR002123 GO:0016746
Gso6g0279 370 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 19 366 - -
Gso6g0279 370 CDD LPLAT_LPCAT1-like 136 357 IPR045252 GO:0008374
Gso6g0279 370 Pfam Acyltransferase 161 278 IPR002123 GO:0016746
Gso6g0279 370 MobiDBLite consensus disorder prediction 1 39 - -
Gso6g0279 370 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 19 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0279 Gso-Chr6 2595296 2600946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0279 1 369 Acyl Lipid Metabolism Gene Families AT1G80950 63.291 1.62e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0279 K13510 - gmx:100775331 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0295 4 2660607 2666998 Gso6g0279 6 2595296 2600946 GST