Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0208 ATGTCTGCGTCCGAAGCGGAGAAGAAGGTCGAGGAGGAAGAGAAGAACCAAGAGGTCAAAGGGGGAGAACTCTTGTTCTGCGGTGCCACGTGTTGGGATATCATTGGTCGTCGCAAAGGCGCCGTCGACGGTAACCTCGTCTCTCCCTCGCGCCTACGTCCTCTCGTCGGCGTCGATATTCGCTACGTCGCCTCCGGCTGCGTGTCTTGTCATTGCGTGGCATTGGACGTTGAAGGGCGTTGTTATACATGGGGACGAAATGAGAAAGGGCAACTGGGTCATGGAGATACCATTCAGCGTGACAGACCAACTGTTGTGTCTGAACTTTCTAAATACAAAATTGTCAAAGCTGGATCAGGGAGGAGCCATACGGTGGTTGTTACGGAGGATGGAAATTCCCTAGCATTTGGATGGAACAAACATGGACAGCTAGGTTCTGGTTCTGTGAGAAATGAAATTGAGTCATCACCTGTTCGCTGTCTTGTGTCTGATGTAAAACATACTGCTTGTGGCGGTGACTTCACTGTCTGGTTATCTTCCGTTGAAGGAGCTTCTATACTGACTGCTGGGCTTCCACAGTATGGGCAGCTTGGGCATGGAACAGATAATGAGTATAATTCCAAAGACAGCTCTGTGAGGTTGGTTTATGAACCCCAGCCACGTCCTCGAGCAATTGCTGCTCTTGCTGGGGAAACAATTGTTAAAGTGGCATGTGGAACAAATCACACAGTGGCTGTGGATAAGAATGGCTTTGTCTACACGTGGGGTTTTGGTGGTTATGGAAGGCTAGGACATAGGGAGCAGAAGGATGAGTGGGTCCCACGCCGTGTTGAAGTTTTTCAAAATAGAAATGTTTTGCCGCCTGATTCAGTCATATCAGCTGGTTCTGTGAATTCTTCATGTACTGCAGGTGGAGGGCAGTTGTATATGTGGGGAAAATTAAAGAACACTGGTGATGACTGGATGTATCCGAAGCCTCTAATGGATTTAAGTGGTTGGAATCTACGATGCATGGATTCAGGCAATATGCACCATTTTGTTGGGGCTGATTCCTCTTGCATAAGTTGGGGACTTGCTCAGAATGGAGAGCTGGGATATGGACCTACTGGACAGAAGTCTTCAGCTGTACCCAAGAAGGTGGATTTACTTGAGGGTATGCATGTAATAAGTGTTGCTTGTGGTATGGGTCATTCCATGGTTATTGTTGATAGAGCAAATGTTGCTGATCGACTTGACCAGCTTGATATATATGATGGGAAAGCTGTTGGTGAAGGTAATGAGGCCGTAAACACAACTCCAGTGCCTAAGCAGGCTGCGAAAAAGGGTGCAAAAGGAGCTGCTGACAATTCGAAGAAGAGGAAACAATTGAAAGATTCATCTGAGTCAGAGGAGGAAGAGGATGCTGAAGAAAGTGAGGATAGTGAGGATGAAATTAATGGTGAGGTTGAGGCAAAAAGGCCTCGTAGTTCTGGTAAAGGCCGAGGTAAGGCTCCGAAAAAGGCGGGGGCCAAGGGAAAAGGCGCTAAGGAAAAAGGTTCTGGCCGTGGACGGGGTGGGACTGCTGCAAATAAAAGCAGTTCTAAATCTCCTCAGGTGAAAACTGGTAAGAGAGGAAGACCCCGTAAGTCATAA 1632 0.4773 MSASEAEKKVEEEEKNQEVKGGELLFCGATCWDIIGRRKGAVDGNLVSPSRLRPLVGVDIRYVASGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGSGRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSDVKHTACGGDFTVWLSSVEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLVYEPQPRPRAIAALAGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVEVFQNRNVLPPDSVISAGSVNSSCTAGGGQLYMWGKLKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGLAQNGELGYGPTGQKSSAVPKKVDLLEGMHVISVACGMGHSMVIVDRANVADRLDQLDIYDGKAVGEGNEAVNTTPVPKQAAKKGAKGAADNSKKRKQLKDSSESEEEEDAEESEDSEDEINGEVEAKRPRSSGKGRGKAPKKAGAKGKGAKEKGSGRGRGGTAANKSSSKSPQVKTGKRGRPRKS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0208 543 Gene3D - 211 413 IPR009091 -
Gso6g0208 543 MobiDBLite consensus disorder prediction 519 533 - -
Gso6g0208 543 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 117 127 IPR000408 -
Gso6g0208 543 Gene3D - 3 210 IPR009091 -
Gso6g0208 543 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 131 181 IPR000408 -
Gso6g0208 543 MobiDBLite consensus disorder prediction 462 478 - -
Gso6g0208 543 SUPERFAMILY RCC1/BLIP-II 21 404 IPR009091 -
Gso6g0208 543 MobiDBLite consensus disorder prediction 445 461 - -
Gso6g0208 543 PRINTS Chromosome condensation regulator RCC1 signature 80 96 IPR000408 -
Gso6g0208 543 PRINTS Chromosome condensation regulator RCC1 signature 114 127 IPR000408 -
Gso6g0208 543 PRINTS Chromosome condensation regulator RCC1 signature 133 149 IPR000408 -
Gso6g0208 543 PRINTS Chromosome condensation regulator RCC1 signature 236 252 IPR000408 -
Gso6g0208 543 PRINTS Chromosome condensation regulator RCC1 signature 252 266 IPR000408 -
Gso6g0208 543 MobiDBLite consensus disorder prediction 424 543 - -
Gso6g0208 543 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 79 130 IPR000408 -
Gso6g0208 543 PANTHER PROTEIN RCC2 6 528 IPR028641 -
Gso6g0208 543 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 184 249 IPR000408 -
Gso6g0208 543 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 391 401 IPR000408 -
Gso6g0208 543 Pfam Regulator of chromosome condensation (RCC1) repeat 130 176 IPR000408 -
Gso6g0208 543 Pfam Regulator of chromosome condensation (RCC1) repeat 187 246 IPR000408 -
Gso6g0208 543 Pfam Regulator of chromosome condensation (RCC1) repeat 78 127 IPR000408 -
Gso6g0208 543 Pfam Regulator of chromosome condensation (RCC1) repeat 249 287 IPR000408 -
Gso6g0208 543 Pfam Regulator of chromosome condensation (RCC1) repeat 355 401 IPR000408 -
Gso6g0208 543 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 351 404 IPR000408 -
Gso6g0208 543 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 236 246 IPR000408 -
Gso6g0208 543 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 250 305 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0208 Gso-Chr6 1984961 1992848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0208 - - gmx:100802977 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0230 4 2092073 2099872 Gso6g0208 6 1984961 1992848 GST