Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0167 ATGGACTCCCTCTCTCTCTTCTGCACCGGAGCCCTTCTCGCCGGCGGCCTCTACTGGTTCGTCTGTGTTCTGGGCCCCGCCGAGCAGAAGGGCAAACGCGCCACCGATCTATCCGGCGGCTCCATCTCCGCCGAGAAAGTCCAAGACAACTACAAGCAGTACTGGTCCTTCTTCCGCCGCCCCAAGGAGATCGAGACCGCCGACAAAGTTCCCGACTTCGTCGACACCTTCTACAATCTAGTCACCGACATCTACGAGTGGGGCTGGGGCCAGTCCTTCCACTTCTCCCCCTCCATCCCCGGTAAGTCCCACCGCGAGGCCACGCGCCTCCACGAGGAGATGGCCGTCGATCTCATCGAGGCCAAGCCCGGCAACAAAATCCTGGACGTGGGCTGCGGCGTGGGCGGGCCCATGCGGGCCATCGCGGCCCACTCCCGCGCGAACGTGGTGGGCATCACCATCAACGAGTACCAGGTCAATCGAGCAAGGATGCACAACAAGAAGGCTGGGTTGGACTCTCTCTGCGAGGTCGTGTGTGGGAATTTCCTTAAGATGCCGTTTGTCGACAACAGCTTCGACGGAGCGTACTCCATCGAGGCCACGTGTCACGCTCCCAAGCTGGAAGAAGTGTACGCCGAAATCTTCCGAGTTCTGAAACCGGGGGCGCTCTACGTTTCCTACGAGTGGGTGACGACGGATAAGTACAGCGGCGATGACCCTGAACACGTGGAGGTCATTCAGGGGATTGAGAGGGGTGACGCGTTGCCTGGCCTCAGAAGCTACGCCGAAATAGCCGAAACGGCGCGTAAGGTAGGGTTTGCTGTTGTGAAGGAGCGGGATCTGGCCAAGCCGCCGGCTCTTCCCTGGTGGAGCCGATTGAAGATGGGTAGGATCGCGTACTGGCGGAACCATATTGTGGTCACTGTTCTCGCCGCTTTGGGAATCGCGCCTAAGGGGACCGTCGATGTTCATGAGATGCTCTTCAAGACCGCTGACTATTTGACCAGAGGGGGTGACTCTGGGATTTTCTCTCCGATGCACATGATCCTCTGCAGAAAGCCCCATGACAAGGACGAACAAAACTCTGGTTAG 1092 0.5907 MDSLSLFCTGALLAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVQDNYKQYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHREATRLHEEMAVDLIEAKPGNKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARMHNKKAGLDSLCEVVCGNFLKMPFVDNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTDKYSGDDPEHVEVIQGIERGDALPGLRSYAEIAETARKVGFAVVKERDLAKPPALPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADYLTRGGDSGIFSPMHMILCRKPHDKDEQNSG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0167 363 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Gso6g0167 363 CDD AdoMet_MTases 126 230 - -
Gso6g0167 363 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 357 - -
Gso6g0167 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 356 IPR029063 -
Gso6g0167 363 Gene3D Vaccinia Virus protein VP39 44 306 IPR029063 -
Gso6g0167 363 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Gso6g0167 363 PANTHER - 1 357 IPR044625 GO:0008168|GO:0032259
Gso6g0167 363 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0167 Gso-Chr6 1571793 1573222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0167 116 280 Acyl Lipid Metabolism Gene Families AT1G73600 29.091 1.42e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0167 K08242 - gmx:100791154 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0184 4 1627781 1629266 Gso6g0167 6 1571793 1573222 GST