Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0152 ATGCCTACACAACTGGTCCAAAAATACGGCTTCAGAAAAAGAAAAAAGAAAAAAACCCAGCGAGCAGCAACTCTACTTTGTATTGAGGTGTCGCACGGCGGGTGTAGTATTAGATTCGGCGTCGAAGAAAAAGAAAGAGCAATGCAAGCTGCGTCTTCAGGCATCGGATACGGTCTAAAATATCAGGCTAGGTGCATATCGGATGTTAAAGCAGACACAGATCACACTAGCTTCCTCGCTGGCACTCTCAGCCTCAAAGAAGAAAATGAGGTACATCTGATTCGGCTTTCGTCGAGTGGAACTGAACTCTTCTGCGAGGGATTGTTCTCTCACCCCAACGAGATCTGGGACCTTGTCTCTTGTCCCTTTGATCAACGGATCTTTTCAACCGTCTACTCTAACGGTGAAACGTATGGGGCAGCAATATGGCAGATCCCCGAGCTATATGGCGAGTTAAATTCACCTCAGCTAGAGAGAATTACCTCACTTGACACAGATTCTGGCAAGATTAAATGTATTCTATGGTGGCCATCTGGAAGACATGATAAATTGATCAACATCAATGAGGAAAACCTGTACTTGTGGAATTTAGACGTTTCAAAGAAAATTGCACTGGTACAATCGCAAGATTCCGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGAACCCACATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCGTATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATGTCAATCGAGTGTTCCCATGTATGCAGTGTTGATTACCATCCCCAAAAGCAGCACATGCTTGTTACTGCAGAACATGAGTCTGGGATACATATTTGGGATCTAAGAAAACCTAAAGTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGACTTGGACTGTCAAGTGTAACCCAGAGTATGATGGAATGATCTTGAGTGCTGGTACGGATTCAACTGTCAACTTGTGGCTTGCCTCAATAAATCATGATGAGTTAACAACTGAAAGACAAGCCAATTCATCTGCCCGATGGGTTGATCCATTGCTTAATACGTACAGTGATTATGAAGACAGCATTTATGGGCTCACATGGAGTTCTTGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTTGAATCAGTGAAGCCTTTCATCTCCAAAAAATAA 1194 0.4347 MPTQLVQKYGFRKRKKKKTQRAATLLCIEVSHGGCSIRFGVEEKERAMQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRHDKLININEENLYLWNLDVSKKIALVQSQDSAGMLHKLSGGAWNPHDVSSVAATCESYLQFWDVRTMKKTMSIECSHVCSVDYHPQKQHMLVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSAGTDSTVNLWLASINHDELTTERQANSSARWVDPLLNTYSDYEDSIYGLTWSSCEPWIFASLSYDGRVVVESVKPFISKK* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0152 397 SMART WD40_4 288 328 IPR001680 GO:0005515
Gso6g0152 397 SMART WD40_4 349 389 IPR001680 GO:0005515
Gso6g0152 397 SMART WD40_4 156 196 IPR001680 GO:0005515
Gso6g0152 397 SMART WD40_4 246 284 IPR001680 GO:0005515
Gso6g0152 397 SMART WD40_4 102 144 IPR001680 GO:0005515
Gso6g0152 397 SUPERFAMILY WD40 repeat-like 65 387 IPR036322 GO:0005515
Gso6g0152 397 PANTHER WD REPEAT-CONTAINING PROTEIN DWA2 48 396 - -
Gso6g0152 397 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 327 IPR001680 GO:0005515
Gso6g0152 397 Gene3D - 39 396 IPR015943 GO:0005515
Gso6g0152 397 PANTHER WD-REPEAT PROTEIN 48 396 IPR040323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0152 Gso-Chr6 1433205 1438264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0152 K23289 - gmx:100791684 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0163 4 1449890 1455488 Gso6g0152 6 1433205 1438264 GST