Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0070 ATGGCTTCTTCCTCGCGCGCAAGGAGTAGCTCACCGTTTTCTTACCGAAAACCTTCGACTCCTTACTCTTCCACTTCTTCATCCTCTTCCTTCATCAACGGAAGGTTAATGCCTCGCTCCAGCTCTTCCTCTACGTCGTCGTTTTTCAACTCCGGAGGCCGATCCATTACTCCGAGTCGCGGTTGCAGCGACTCGGCGTATCACGGTTCGCGCGGTTACGCCGCCCGTTCTCCGGTGGCGTTCGGAGCGGAGGAGCTGATTGCGGAGCAGATGGTGGATTCGTCGAGGACCGGCGATAGCATTTCGGTCACGATTCGGTTTAGGCCGTTGAGTGAAAGGGAATATCAGAGAGGGGACGAGATCGCGTGGTATGCCGATGGCGACAAAATTGTCAGAAATGAGTATAATCCAGCTACTGCTTATGCATTTGATAGAGTTTTTGGACCACATACAAATTCAGACGAAGTGTATGAAGTGGCAGCGAAACCTGTGATAAAGGCTGCCATGGAGGGCGTCAATGGAACTGTGTTTGCCTATGGTGTGACAAGTAGTGGTAAGACACATACTATGCATGGAGACCAAAATTCTCCTGGTGTCATACCACTGGCTATAAAGGATGTTTTCAGTATGATTCAAGATACCCCAGGAAGAGAATTCTTACTCCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGATTTACTTGATCCAACTGGCCAAAATTTGCGAGTTAGAGAAGATGCACAGGGAACTTATGTGGAGGGCATAAAGGAAGAAGTTGTTTTATCTCCTGGACATGCACTTTCTTTTATTGCTGCTGGAGAAGAGCATCGCCATGTTGGATCGAACAATTTTAATCTCTTTAGCAGCCGGAGTCACACAATATTTACACTGATGATAGAAAGCAGTGCTCATGGTGATGACTATGATGGAGTCATCTTCTCTCAGCTAAACTTGATTGATTTGGCTGGATCTGAGAGCTCAAAAACTGAAACAACTGGATTAAGAAGAAAGGAAGGATCTTACATCAACAAAAGTCTTCTGACACTTGGAACTGTTATAGGAAAACTGAGCGAGGGGAAGGCATCTCATGTTCCGTATCGAGATTCAAAGCTAACCCGCCTCCTGCAATCTTCTCTTAGTGGGCATGGCCATGTTTCACTTATATGCACAGTAACTCCAGCATCCAGTAACACGGAGGAAACTCATAATACCTTGAAGTTTGCCAGCAGGGCAAAACGAGTTGAAATATATGCGTCACGTAATAAGATTATTGATGAGAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCAGTCCTCAAAGTAGAACTTGATCAACTAAAGAAGGGGATGCTAGTTGGTGTCAATCATGAGGAGATTTTGACCTTAAAGCAAAAGTTAGAAGAAGGTCAAGTGAAAATGCAATCAAGATTGGAAGAAGAGGAGGAAGCCAAGGCTGCTCTTATGAGTAGGATCCAGAGGCTAACCAAACTCATTCTGGTTTCCTCAAAGAATGCAATTCCTGGATATCTAACTGATGTTCCCAACCATCAGCGAAGTCACTCTGTTGGCGAGGATGATATTGAAAATGAGAGTCAGAAAGATTCTTCTGCAGTGTCATCAGATCAGTTTCATGATGGTAGACATAAAAGATCATCTAGTAGATGGAATGAAGAGTTCTCCCCAGCTAGCAGTACTGTTACTGAATCAACACAAGCTGGTGAACTGATAAGTAGAACAAAATTGACAGTGGGTGGGATGACAATGTCTGATCAGAAGGATCTACTGGTTGAACAAGTCAAAATGCTAGCCGGAGATATTGCTTTCAGTACCAGCACTCTGAAGCGCTTGATGGAGCAATCTGTAAATGACCCTGAAGGCTCCAAAATTCAGATTGAGAACTTGGAACGTGAGATCCAAGAAAAAAGGAAGCAAATGAGGGTGTTAGAACAAAGGTTAATTGAGACTGAAGAATCTCCTGTGGCTAATTTATCGCTAGTTGAAATGCAGCAGACAGTTACAAAGTTAATGACTCAATGTAATGAAAAGGCCTTTGAGTTGGAGCTAAAATCTGCAGACAACCGTGTCCTTCAGGAACAGCTAATTGATAAGTGTTCTGAAAACAGAGAGTTGCAAGAAAAGGTGAAGCAGCTAGAGCAGCAACTGGCGGCAATTAATAGTGGTACATTGTCAGTGTCTTCTGAACAGTGTGCATCAGGAGAAAACATTGATGACTTGAAAAAGAAAATACAATCCCAGGAAATTGAAAATGAAAAACTAAAGCTAGGGCAAGTTCACTTGTCAGAAGAGAATAGTGGGTTGCGTGTGCAGAATCAGAAACTCTCCGAAGAAGCTTCTTATGCCAAAGAACTGGCCTCTGCTGCTGCTGTGGAGCTGAAAAATTTGGCCGGGGAAGTGACAAAACTTTCATTGCAGAATGCAAAGTTGGAAAAAGAATTGATGGCCGCGCGAGACCTGGTCAACTCTCGTAGTGCTGTTGTGCAAACGGTTAATGGTGTCAACCGCAAGTACAATGATCCAAGAGCTGGAAGGAAGGGGAGGATTTCTAGCCGTGCTAATGAAATTTCAGGAACTGGTGTAGATGATTTTGAGTCAAGGAGTCTTGATGCTGATGATTTAAAGATAGAACTACAGGCTAGGAAACAACGAGAGGCAGCTCTGGAAGCTGCATTAGCCGAGAAGGAATTTGTGGAAGAACAGTACCGGAAAAAAACTGAAGAGGCCAAGAGAAGAGAAGAAGCCTTGGAGAACGATTTAGCAAATATGTGGGTCCTTGTTGCTAAGTTAAAAAAAGACGGGGGTGCTGTTCCAGAATCAAACATCGATAAAAAAAATGATGGCGCAGAACACATAAATGGTCCAAAAACTAATGACGTTGAAAGTAATATTGTTCCCAAGGAGCATCTTTTGGATGCACCGAAACCAGATGAGGAAATGCCCAAAGAAGAGCCCTTGGTTGTTCGCCTCAAGGCGCGCATGCAAGAAATGAAGGAAAAAGAACTCAAGTACCTTGGAAATGGTGATGCCAATTCCCATGTTTGTAAAGTATGTTTTGAATCTCCAACTGCCGCAATTCTGCTTCCATGCCGACATTTTTGTTTGTGTAAATCTTGTTCACTTGCTTGTTCTGAGTGTCCAATATGCCGCACAAGTATTACTGATAGGATTTTTGCTTTTACATAA 3213 0.4317 MASSSRARSSSPFSYRKPSTPYSSTSSSSSFINGRLMPRSSSSSTSSFFNSGGRSITPSRGCSDSAYHGSRGYAARSPVAFGAEELIAEQMVDSSRTGDSISVTIRFRPLSEREYQRGDEIAWYADGDKIVRNEYNPATAYAFDRVFGPHTNSDEVYEVAAKPVIKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGVIPLAIKDVFSMIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGDDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNTEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKVELDQLKKGMLVGVNHEEILTLKQKLEEGQVKMQSRLEEEEEAKAALMSRIQRLTKLILVSSKNAIPGYLTDVPNHQRSHSVGEDDIENESQKDSSAVSSDQFHDGRHKRSSSRWNEEFSPASSTVTESTQAGELISRTKLTVGGMTMSDQKDLLVEQVKMLAGDIAFSTSTLKRLMEQSVNDPEGSKIQIENLEREIQEKRKQMRVLEQRLIETEESPVANLSLVEMQQTVTKLMTQCNEKAFELELKSADNRVLQEQLIDKCSENRELQEKVKQLEQQLAAINSGTLSVSSEQCASGENIDDLKKKIQSQEIENEKLKLGQVHLSEENSGLRVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELMAARDLVNSRSAVVQTVNGVNRKYNDPRAGRKGRISSRANEISGTGVDDFESRSLDADDLKIELQARKQREAALEAALAEKEFVEEQYRKKTEEAKRREEALENDLANMWVLVAKLKKDGGAVPESNIDKKNDGAEHINGPKTNDVESNIVPKEHLLDAPKPDEEMPKEEPLVVRLKARMQEMKEKELKYLGNGDANSHVCKVCFESPTAAILLPCRHFCLCKSCSLACSECPICRTSITDRIFAFT* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0070 1070 SUPERFAMILY RING/U-box 1023 1064 - -
Gso6g0070 1070 Coils Coil 635 662 - -
Gso6g0070 1070 Pfam Zinc finger, C3HC4 type (RING finger) 1022 1064 - -
Gso6g0070 1070 MobiDBLite consensus disorder prediction 560 576 - -
Gso6g0070 1070 MobiDBLite consensus disorder prediction 522 536 - -
Gso6g0070 1070 Coils Coil 433 453 - -
Gso6g0070 1070 ProSiteProfiles Kinesin motor domain profile. 100 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 MobiDBLite consensus disorder prediction 947 963 - -
Gso6g0070 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 452 IPR027417 -
Gso6g0070 1070 Coils Coil 746 766 - -
Gso6g0070 1070 ProSiteProfiles Zinc finger RING-type profile. 1024 1059 IPR001841 -
Gso6g0070 1070 PANTHER KINESIN-RELATED 1 1000 IPR027640 GO:0003777|GO:0007018
Gso6g0070 1070 PRINTS Kinesin heavy chain signature 171 192 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 PRINTS Kinesin heavy chain signature 285 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 PRINTS Kinesin heavy chain signature 318 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 PRINTS Kinesin heavy chain signature 367 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 998 1069 IPR013083 -
Gso6g0070 1070 MobiDBLite consensus disorder prediction 544 559 - -
Gso6g0070 1070 Coils Coil 880 928 - -
Gso6g0070 1070 Coils Coil 467 501 - -
Gso6g0070 1070 ProSitePatterns Kinesin motor domain signature. 317 328 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso6g0070 1070 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 1 1000 - -
Gso6g0070 1070 Pfam Kinesin motor domain 106 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 Gene3D Kinesin motor domain 91 447 IPR036961 -
Gso6g0070 1070 Coils Coil 697 731 - -
Gso6g0070 1070 Coils Coil 802 829 - -
Gso6g0070 1070 MobiDBLite consensus disorder prediction 1 63 - -
Gso6g0070 1070 CDD KISc_CENP_E 100 417 - -
Gso6g0070 1070 MobiDBLite consensus disorder prediction 947 970 - -
Gso6g0070 1070 SMART kinesin_4 98 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso6g0070 1070 MobiDBLite consensus disorder prediction 514 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0070 Gso-Chr6 710011 723865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0070 35 1069 Miscellaneous Gene Families AT4G39050 71.659 0.0 1477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0070 K11498 - gmx:100785855 1965.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0079 4 722634 736697 Gso6g0070 6 710011 723865 GST