Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0067 ATGAGTTCAGACAGCCGCAGCAGGAGCAGGAGCAGAAGCAGGAGCCCAATGGACCGTAAGATCCGCTCTGATCGATTTTCCTATCGAGATGCACCTTACAGGAGAGATTCACGTCGGGGTTTCAGCCGAGACAATCTGTGCAAGAACTGCAAGAGGCCTGGTCATTATGCAAGAGAATGCCCGAATGTTGCAATTTGCCACAACTGTGGCCTCCCTGGGCACATTGCTTCTGAATGTACCACAAAGTCGCTGTGCTGGAACTGTAAAGAACCTGGCCACATGGCCAGCAGTTGTCCAAATGAGGGCATTTGCCACACCTGTGGTAAAGCTGGACACCGTGCTAGGGAATGCTCAGCCCCTCCAATGCCTCCAGGGGACTTGAGGTTGTGCAACAACTGTTATAAGCAGGGGCACATTGCCGCGGAATGTACGAATGAGAAGGCTTGCAACAACTGTAGGAAGACAGGCCACTTGGCACGTGATTGTCCTAACGATCCAATTTGTAATTTGTGCAATGTTTCTGGGCATGTGGCTAGACAGTGTCCGAAAGCCAATGTTCTTGGAGACCGCAGTGGTGGCGGTGGTGGCGGCGGCGGTGCTCGTGGTGGCGGCGGCGGTGGCTACCGAGATGTTGTTTGCAGGAACTGCCAGCAATTAGGTCACATGAGTAGGGATTGCATGGGCCCCTTGATGATTTGTCACAATTGTGGAGGTCGTGGTCACCTGGCATATGAGTGCCCTTCGGGTCGGTTTATGGACCGCTACCCCAGGAGGTACTGA 780 0.5359 MSSDSRSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASSCPNEGICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANVLGDRSGGGGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0067 259 Gene3D - 148 197 - -
Gso6g0067 259 Gene3D - 102 147 - -
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 66 79 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 233 248 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 168 183 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Gene3D - 82 101 - -
Gso6g0067 259 SUPERFAMILY Retrovirus zinc finger-like domains 38 82 IPR036875 GO:0003676|GO:0008270
Gso6g0067 259 SUPERFAMILY Retrovirus zinc finger-like domains 124 165 IPR036875 GO:0003676|GO:0008270
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 213 226 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SUPERFAMILY Retrovirus zinc finger-like domains 202 250 IPR036875 GO:0003676|GO:0008270
Gso6g0067 259 Gene3D - 24 81 - -
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 104 117 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 85 100 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 167 183 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 46 62 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 66 80 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 232 248 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 212 226 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 103 118 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Pfam Zinc knuckle 148 164 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 130 145 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 PANTHER - 1 259 - -
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 85 100 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 PANTHER OS10G0545300 PROTEIN 1 259 - -
Gso6g0067 259 SUPERFAMILY Retrovirus zinc finger-like domains 83 120 IPR036875 GO:0003676|GO:0008270
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 47 62 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 Gene3D - 208 250 - -
Gso6g0067 259 MobiDBLite consensus disorder prediction 1 29 - -
Gso6g0067 259 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 232 248 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 129 145 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 84 100 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 212 228 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 167 183 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 46 62 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 103 119 IPR001878 GO:0003676|GO:0008270
Gso6g0067 259 SMART c2hcfinal6 65 81 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0067 Gso-Chr6 669862 675115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0067 K09250 - gmx:100775501 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0076 4 676712 681016 Gso6g0067 6 669862 675115 GST