Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0064 ATGGCACTTCCTAAGTCCAACGCCAAACTCACTCTTGTTCTTCTTTTTCTTGTTTTCATTATTAATTCAGGAAGCGCCCACAATTACAAGGAGGCATTGTCCAAGGCAATCCTATTCTTCGAGGGCCAACGTTCGGGTTTCTTGCCGCAGGACCAGAGACAGACCTGGCGCGCCAATTCGGCTCTTGGTGACGGCTGGACCTACAAGCTCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACATCAAATTCGGGTTTCCGATGGCATTCACCACCACAATGCTGTCCTGGAGCGTCATCGAATTCGGAGACATGATGCCTCCCAATGAACACCGAAACGCGCTGCTCGCAATCCGTTGGGCTACCGATTATTTGCTCAAAACCGTTTCTCAGCCAAACCGCATTTTCGTTCAGGTGGGTGATCCAATCTCTGACCACAATTGTTGGGAAAGGCCTGAGGACATGGACACAAACAGGACAGTGTATGCTGTTGATGCTCCAAACCCAGCTTCAGATGTAGCTGGTGAAACTGCTGCGGCACTAGCTGCTGCATCAATGGCTTTTCGTTCATCGGATCCTTCTTATTCAGAGACTTTGCTACGAAATGCTGCTAAGGCCTTTCAATTTGCAGATACCTATAGGGGTGCCTACAGTGACAATGCTAATGTTAGGAGTGGTGTTTGCCCATATTATTGTGACTTCGATGGTTATCAGGACGAATTGTTATGGGGAGCCGCATGGCTAAGGAGGGCTACTCAGGATGAAAATTTCCTCAACTACATTCAAAGCAATGGCAAAACCCTTGGTGCTGAAGACAATATAAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTTAATGTTCTTGTCTCCAAGGAAGTTCTAGATGGAAACGTAATGTCTCTTGAATCCTACAAGACTTCAGCAGAGAGCTTTCTGTGCACGCTCATACCCGAAACATCAAGTTCACATATAGAGTACACTCCCGGTGGACTAATATACAGGCCTGGGGGCAGCAACTTGCAACATGCAACTTCAATTGCATTCCTTGAATTGGTTTACGCCAATTACCTATCTCGCACTTCACAAACCATCAATTGTGGGAACGTCTATGTTAACGCACAAACACTTCGCCAGCATGCTAAGAAGCAAGTTGATTACATTTTGGGAGATAACCCAATGGGTATGTCGTACATGGTTGGTTACAGCAACAAGTATCCGCAGCATATTCACCACCGTGGCTCCTCTTTACCCTCTATCAAGGACCATCCTCAATTCATTGCCTGCAAAGAAGGTTCAATCTACTTCAACTCAAGCAATCCTAATCCTAATGTTCTCGTGGGAGCTATTGTGGGAGGACCAGGTGAAGATGATGTGTATGAGGATGATAGGGCTGATTTTAGGAAGTCCGAACCAACCACATACATTAATGCACCATTTGTTGGGATTTTAGCATACTTTGTTGCTAATCCCAACCCTTGA 1485 0.4667 MALPKSNAKLTLVLLFLVFIINSGSAHNYKEALSKAILFFEGQRSGFLPQDQRQTWRANSALGDGWTYKLDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGDMMPPNEHRNALLAIRWATDYLLKTVSQPNRIFVQVGDPISDHNCWERPEDMDTNRTVYAVDAPNPASDVAGETAAALAAASMAFRSSDPSYSETLLRNAAKAFQFADTYRGAYSDNANVRSGVCPYYCDFDGYQDELLWGAAWLRRATQDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVLDGNVMSLESYKTSAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNVYVNAQTLRQHAKKQVDYILGDNPMGMSYMVGYSNKYPQHIHHRGSSLPSIKDHPQFIACKEGSIYFNSSNPNPNVLVGAIVGGPGEDDVYEDDRADFRKSEPTTYINAPFVGILAYFVANPNP* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0064 494 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Gso6g0064 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Gso6g0064 494 PANTHER ENDO-1,4-BETA-GLUCANASE 10 493 - -
Gso6g0064 494 Gene3D - 25 492 IPR012341 GO:0005975
Gso6g0064 494 PANTHER ENDOGLUCANASE 24 10 493 - -
Gso6g0064 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Gso6g0064 494 SUPERFAMILY Six-hairpin glycosidases 12 490 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0064 Gso-Chr6 642450 646628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0064 10 491 Glycoside Hydrolase AT1G70710 60.996 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0064 K01179 - gmx:100814545 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0073 4 645683 649887 Gso6g0064 6 642450 646628 GST