Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0038 ATGCAAGATATCCCCTTCTGTAGCCTTATAGTTTTCTTCTTTCTAATAGGGGCTTCTTTGGTTTCCCCTTTATATGATGGGCCCCTATATGACTCCACTGCCTACACTGAGTGCAAAGAGAAGCCAGAGGAACCACTTTATGGAGGAGGACTTTTCAAGACTGAGCAACACTCTCGTCGTGGCAGCATTGCCAACAACAGCTATGTGCCTTCACTTGCTCTGTATAATCTCACTCAGGGCACCATTTACTCTTTTTCCGCATGGGTGAGAGTTAAAGATTCAAGTTCAGCTATGATAAGGACCACTCTGGAAACGGAGAAAGAGACACATGATTGCATTGGGACAGTTTCGGCCAAGCATAGATGCTGGTCATTTCTGAAGGGTGGATTTGTTCTGAATTGGCCTTCAAATTTATCCATTATCTTCTTCCAGAACGCTGATGGTAAAGATATCAATATAGATGTTGCTAGCCCATCACTCCAGCCATTTACTAAGCAACAATGGAGAATCAATCAACAGTATATAATCAACACTCAAAGAAAGCGTGCCGTCACTATTCATGTGTCAGATAGTAACGGAAGGAGATTGGAAGGAGCTTCGATCTGTGTAGAGCAAATCTCAAAAGACTTCCCTTTTGGATCTGCAATAGCAAAGACCATTCTTGGCAACGTTCCCTACCAGAATTGGTTTGTGAAGCGGTTCAACGCGGCAGTGTTTGAAAATGAGCTCAAATGGTACGCCACAGAACCTGATCAAGGCAAGGTCAATTACACCATTTCAGACCAGATGCTGCAATTTGTTAGAACAAACAACATCATAGCGAGAGGGCACAACATATTTTGGGAAGACCCTAAATACACTCCTCCGTGGGTTCTTAACCTTACAGGCACCCAGTTACAATCTGCTGTGAATTCTCGAATACATAGTCTCATGAGCCAATACAAAGATGAGTTCGTACACTGGGACGTCAGCAATGAAATGCTCCATTTTGATTTCTACGAGGAAAGGCTTGGACCTAATGCCACATTGCATTTCTTTCAGACAGCACATAAATCGGATCCATTGGCAACTCTGTTTATGAATGACTTCAATGTTGTGGAAACATGCAGTGATGTAAAATCCACTGTTGACGCCTATATCTCACGGGTAAGAGAACTGCAACGAAATGGCATCTTTATGGATGGAATTGGCTTGGAGGGTCACTTCACAATACCCAATCCTCCCCTTATCAGAGCCATCCTAGACAAGTTGGCAACACTTGGCCTTCCCATTTGGCTTACCGAGGTGGATATAAGCAAGACACTTGATAGAGATGCACAGGCAAATTATTCGGAGGAAGTGCTGAGGGAAGGCTTCTCACATCCCTCTGTGAATGGGATAATGCTTTGGACGGCATTACATCCAAATGGGTGCTACCAAATGTGCCTGACAGACAATAATTTCAAGAACCTCCCAGCAGGTGATGCGGTGGACAAACTTCTTCAAGAGTGGCAAACGGGTCGTGTAGAGGGAGTCTCAGATGTGCACGGTTCCTATAGCTTTTATGGGTTCTTAGGAGAATACAGAATTAGTGTCAAGTATGGCAATAACACTACAAAGTCAACATTCTCCCTCTCTCGAGGTGATGAAACTAGACATTTCACTATTACAATATGA 1656 0.436 MQDIPFCSLIVFFFLIGASLVSPLYDGPLYDSTAYTECKEKPEEPLYGGGLFKTEQHSRRGSIANNSYVPSLALYNLTQGTIYSFSAWVRVKDSSSAMIRTTLETEKETHDCIGTVSAKHRCWSFLKGGFVLNWPSNLSIIFFQNADGKDINIDVASPSLQPFTKQQWRINQQYIINTQRKRAVTIHVSDSNGRRLEGASICVEQISKDFPFGSAIAKTILGNVPYQNWFVKRFNAAVFENELKWYATEPDQGKVNYTISDQMLQFVRTNNIIARGHNIFWEDPKYTPPWVLNLTGTQLQSAVNSRIHSLMSQYKDEFVHWDVSNEMLHFDFYEERLGPNATLHFFQTAHKSDPLATLFMNDFNVVETCSDVKSTVDAYISRVRELQRNGIFMDGIGLEGHFTIPNPPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYSEEVLREGFSHPSVNGIMLWTALHPNGCYQMCLTDNNFKNLPAGDAVDKLLQEWQTGRVEGVSDVHGSYSFYGFLGEYRISVKYGNNTTKSTFSLSRGDETRHFTITI* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0038 551 PANTHER GLYCOSYL HYDROLASE 4 550 IPR044846 GO:0004553|GO:0005975
Gso6g0038 551 SUPERFAMILY Galactose-binding domain-like 76 154 IPR008979 -
Gso6g0038 551 Gene3D Glycosidases 201 507 - -
Gso6g0038 551 SMART glyco_10 243 494 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 4 550 - -
Gso6g0038 551 Pfam Glycosyl hydrolase family 10 205 465 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 PRINTS Glycosyl hydrolase family 10 signature 274 286 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 PRINTS Glycosyl hydrolase family 10 signature 318 329 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 PRINTS Glycosyl hydrolase family 10 signature 356 367 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 PRINTS Glycosyl hydrolase family 10 signature 389 401 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 SUPERFAMILY (Trans)glycosidases 196 501 IPR017853 -
Gso6g0038 551 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 197 493 IPR001000 GO:0004553|GO:0005975
Gso6g0038 551 Gene3D - 56 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0038 Gso-Chr6 394267 397664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0038 26 551 Glycoside Hydrolase AT4G38650 66.292 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0038 - - gmx:100806005 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0041 4 399547 403315 Gso6g0038 6 394267 397664 GST