Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0026 ATGGAGGAAGGTAAAGAATGGAGCGTGAAAGAGAAGAACGAAACTACGACGCGACCATCCCTAAAATCGGATGTTCCATTCAACAAATATGAACTATGGAAACACAAGTTGAGGGACAATTGCTACAAAAGGGTGCGAGAGGACAGAACTCGCTTACTCTGGAAATTTAGATACAACCAACAGGAGGAGGAGGACATCGTCAAGTGTGCATTCCAGGATATTGTATCTGATGAATTGAACAAAATCAAACGCACGGATGAGCTGTTATGGGAGTATGAAGGTCCTCACCAGGGTGAATGCCAAGACATTTTGTTAGAAATGCAAAGGATCTTTTATCAAGATCTCAATTCCCAATCAACCATACAAGATTTAGAATGTGATATTGAAACTTGGGAAGATGAAGTGGATGAGTACCTGGCTCGTGCAGTTTTTGAGCATATGCAGCTAAATGAAGATGAGGCTCATGGGAAAGAGATTTGGTGTCCTATATGTAAGCAAGGAGAGCTTAAAGACAGTCACAATCTTATACACTGCACTCGTTGTGAACTTCAACTAAACAAAGCTAGTGAGCTTACTTTGGACTTTTTACGGGACCGGCTGGCTGAAGCCCACACAGAGCATCTTGATAAAGGTTGCAGATTGAAACCCAAATTTTGTATGAGGACAAAGTTTAATTTAACTGCACTGTACATTTCATGTGAAGGTTGTGATACATTTGAGGTTGTAATTTAA 732 0.4057 MEEGKEWSVKEKNETTTRPSLKSDVPFNKYELWKHKLRDNCYKRVREDRTRLLWKFRYNQQEEEDIVKCAFQDIVSDELNKIKRTDELLWEYEGPHQGECQDILLEMQRIFYQDLNSQSTIQDLECDIETWEDEVDEYLARAVFEHMQLNEDEAHGKEIWCPICKQGELKDSHNLIHCTRCELQLNKASELTLDFLRDRLAEAHTEHLDKGCRLKPKFCMRTKFNLTALYISCEGCDTFEVVI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0026 243 Pfam Replication protein A interacting N-terminal 28 57 IPR028158 -
Gso6g0026 243 PANTHER RPA-INTERACTING PROTEIN RPAIN 12 243 IPR028156 -
Gso6g0026 243 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g0026 243 Pfam Replication protein A interacting C-terminal 160 241 IPR028159 -
Gso6g0026 243 Pfam Replication protein A interacting middle 70 143 IPR028155 -
Gso6g0026 243 MobiDBLite consensus disorder prediction 1 18 - -
Gso6g0026 243 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0026 Gso-Chr6 248616 251749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0026 - - gmx:100803333 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0023 4 230112 233922 Gso6g0026 6 248616 251749 GST