Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2082 ATGATACTGACACTACTGCCTCCTCCAAAATCACCATTCTTGAATACCCTTTTGCTCCTCTGCACTACTCTCCTCCTCCCACCTTGCTACCTGGCTCTCCCTGACCCTGATGCTGATGCGGTTCAGCCAATCATCCCAAACCCCTCATCTTCAACAGGAACAATCCCTGCATTCCCAGAACAAGCTGATGCTGCAGGGTGCCCTCTCAGCCTCTCAGATGAGCACTACGAAGGCATAAAGAGTGCATGTGGCTCCAACAAACATGCTGCAGATGATGATGATGACCTCCACCGTAGCAGATGCTGTCCTGTGCTGGCAGCGTGGCTCTATTCTGCATACTCAGCCACTGCCCTTAGTGGTGGAATGCAACATGAACGTGCCTCAAAGGGCCATACCACATCCTATGACATGCCCTTGTTGCCTGATGATTCAGAAACATGTGTGAGTGACTTGGGGAAGGCCTTGAAAATTAGAGAAATCCAGCTTTTTCAGCCCAATGAGACTTGTGATCTGGTCTATTGCTACTGTGGCATTAGGCTTCACCCTTTGACCTGTCCTGAGTCATTCTCAGTTACTCCAAGTGGAACTCTTGTTGTCAATCAAAGTGTGAAAAGATTGGAGAGGGATTGCTTCAGTAGCAGCACCAATGTCAATAAGTTTCCCGGCCTGGGAGGATGCTCCAAGTGCTTGCATAGTCTCTATTCGCTTAGGAAGAATTCTTCAAATTCAAGCAAGTCAGAAGATAGGACCACCAAGATCCATAACAAAGATTGTGAACTAATGGGCCTGACATGGCTTCTGGCTAAGAATAGAACAGCTTACATTCACACAGTTTCTGGGGTTCTTCGAGCTTTGATGTTGAGCACTGAAGGCTCTGACCCACAATCATGCACTCTAAACAGTGATGGAATGCCTCTTGCCGTTGATTCCTCTGAAATGTCAGATGAATCTTCATCAACCAACCTACAAGCACCAATTTTCCTCTCTTTGTTACTATTTCTACATTATTTCACTCTATTATGCACCTAA 1029 0.4645 MILTLLPPPKSPFLNTLLLLCTTLLLPPCYLALPDPDADAVQPIIPNPSSSTGTIPAFPEQADAAGCPLSLSDEHYEGIKSACGSNKHAADDDDDLHRSRCCPVLAAWLYSAYSATALSGGMQHERASKGHTTSYDMPLLPDDSETCVSDLGKALKIREIQLFQPNETCDLVYCYCGIRLHPLTCPESFSVTPSGTLVVNQSVKRLERDCFSSSTNVNKFPGLGGCSKCLHSLYSLRKNSSNSSKSEDRTTKIHNKDCELMGLTWLLAKNRTAYIHTVSGVLRALMLSTEGSDPQSCTLNSDGMPLAVDSSEMSDESSSTNLQAPIFLSLLLFLHYFTLLCT* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2082 342 Pfam SPARK 63 247 IPR043891 -
Gso5g2082 342 PANTHER GPI-ANCHORED PROTEIN 1 341 IPR040376 -
Gso5g2082 342 PANTHER PROTEIN, PUTATIVE-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2082 Gso-Chr5 43789508 43792465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2082 - - gmx:100782282 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2082 5 43789508 43792465 Gso8g0438 8 4087211 4089938 GST
Gso5g2082 5 43789508 43792465 Gso7g0849 7 9614404 9617602 PCT
Gso5g2082 5 43789508 43792465 Gso9g1462 9 38759853 38762973 PCT
Gso7g0849 7 9614404 9617602 Gso5g2082 5 43789508 43792465 PCT
Gso9g1462 9 38759853 38762973 Gso5g2082 5 43789508 43792465 PCT