Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1994 ATGCCGCTATGTCCCAAAGAAGAAGCACTTGTTAAACTCTTCTACAATGTCTCTAGCCCTTTCCAGCTTCTCTTCCTCATTCTCTTCTCCTCTGCCGTTTTCCTTGTCACCTTCTTAACCTTCACAGGCAGATTCCCCTTAATCCAAAGGGATCAAGAATATGAATATGTGTATACCGAGGATGAAGAAGAAGAGGAAGAAGAAACTCAAGAAGGGTATTCTTGTGTTGATTCTACTGACAGATTAGAAGTAACTTGTGGCAAGGAGACTCGTGTGTTTCTGCACAATGAGGGGCATCAGAGGACTCATTCTTATTCGGAAGAATTCATAAGCCCCGAGGAGAGCTTGAATGAAGAGTCAGAAGAAAAGCATTATTCTGAAACGTTGTCTCTCCATAACTCAGCACAAGTTTCTGACTTCGAAAATGAAGAAGCGGAAACGGTTCAAGTAGACTTTCCAGCAAGAGATGCCGATTCTGCCCAGGTTGAAAGAAGGACCACCTCTCCCATCAACCTCACCGCATACAAAAGAAACAAAAACCGTGACGACGATCATGTTAGCGTTGAAATTATTAAAAACAAGAAGGTGCAAGAGACAAACCTTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAATTGCAGAGTAAGAAGTTAATGATTGAAGAGAGGGATGATGAGTCCTCGAAATGGAAGAGCTCCATCATTGGCAGGGATTCTGATACTGAAGACGCATTTTCTTCTTCATCAAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAGATGGCAATCCTAGACAGAATTAGTGCACAGAAACATCATGAAACTGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAAAATGTAAATAAAAAGCCCGCTGAGGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATATGTTGCACAAATTTGTTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGATCATGATACCGGTTGTTCTGCCACCGTTGCACAGCAATTCCAGCAATTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCATGGCAGGAGACCTGAGATCTTTGCTAGAATGAGGCTTTTGGCACCAAACTTGCTCCTAGTGCCAGAATATCAAGATTTAGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTAAAGATAATGGAGGACGGGATCAAGACATTCATGAATTTTCTGAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTGCTTTAGGAGAAACCAAAGAGGCACGGTTGATCCAGCACTACTCCGACTAATGAAGAAGGTTAATCAAAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCACTCATAGACCTAAAAGTGGTGTCAAGGGTTTTAAGAATGCATGACTTAAGTGAAGAGCAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCACCCCACTTTTCTTCCCCTCACATTGA 1695 0.4177 MPLCPKEEALVKLFYNVSSPFQLLFLILFSSAVFLVTFLTFTGRFPLIQRDQEYEYVYTEDEEEEEEETQEGYSCVDSTDRLEVTCGKETRVFLHNEGHQRTHSYSEEFISPEESLNEESEEKHYSETLSLHNSAQVSDFENEEAETVQVDFPARDADSAQVERRTTSPINLTAYKRNKNRDDDHVSVEIIKNKKVQETNLARDERFFVFASTQLQSKKLMIEERDDESSKWKSSIIGRDSDTEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKHHETESLRSIQMSPRSMSERIVYKFQNVNKKPAEVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDHDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIFARMRLLAPNLLLVPEYQDLEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAACFRRNQRGTVDPALLRLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALIDLKVVSRVLRMHDLSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1994 564 Pfam Protein of unknown function (DUF1666) 323 562 IPR012870 -
Gso5g1994 564 PANTHER DNA LIGASE (DUF1666)-RELATED 4 564 - -
Gso5g1994 564 PANTHER DUF1666 FAMILY PROTEIN 4 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1994 Gso-Chr5 43044032 43047761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1994 - - gmx:100776190 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1994 5 43044032 43047761 Gso8g0349 8 3301148 3304694 GST
Gso5g1994 5 43044032 43047761 Gso7g0789 7 8697395 8701405 PCT
Gso5g1994 5 43044032 43047761 Gso9g1512 9 39378303 39382751 PCT
Gso7g0789 7 8697395 8701405 Gso5g1994 5 43044032 43047761 PCT
Gso9g1512 9 39378303 39382751 Gso5g1994 5 43044032 43047761 PCT