Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1701 ATGGGTGTGTCGAAATTGGGTTTTTTGGGGCTTCTTTTTGCTGATTTTCTCTTTGCAGTTGGAGCTGTGGAGCTGGGCAGGAACCAACCCACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAGGATCCAAGATGTCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGGTTTCTCTTATCCAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCACCACGAATGATGAGAAGTGCTATACAGCTTATTTCTTCAAACTGGCCTTATTGGAACCGGACAGAGGGGGCTGATCACTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTACACTACTACGGCGTGCTACCTTGGTTCAAACATTTGGACAGAGAAATCATGTGTGCTTGAAAGAGGGCTCGATTACCATCCCTCCGTATGCTCCACCACAGAAAATGCATACCCACCTAATTCCTGACAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTCTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGCGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCTGCTGTTTGACATCTCCACTGAGCATCCAACCACTTACTACGAGGACATGCAAAGAGCCGTGTTTTGTCTGTGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTAGAAGCTGTGATATTTGGTTGCATCCCTGTTATTATTGCAGATGACATTGTTCTTCCATTCGCTGATGCAATCCCATGGGAAGAGATAGGGGTGTTTGTTGATGAGGAGGATGTTCCCAAGTTGGATACAATACTCACATCTATCCCACCAGAAGTCATATTAAGGAAACAGAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCCGGAGACGCGTTCCATCAAGTTTTAAATGGACTTGCACGTAAGCTGCCTCACGACAACACCGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGACCTGTGGGAGACCTTAAACCTTGGTAA 1251 0.4532 MGVSKLGFLGLLFADFLFAVGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILTLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNLLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKILNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1701 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Gso5g1701 416 Pfam Exostosin family 49 344 IPR040911 -
Gso5g1701 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1701 Gso-Chr5 40261544 40264887 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1701 K20870 - gmx:100812747 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1701 5 40261544 40264887 Gso6g1352 6 13281034 13282878 PCT
Gso4g1708 4 47104883 47109559 Gso5g1701 5 40261544 40264887 PCT
Gso6g1383 6 13558701 13563446 Gso5g1701 5 40261544 40264887 PCT