Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1670 ATGAGCTCCAGCAATTTGACGGGGTTTGTGTTGGCCGTGCTTTCCAGCGCTTTCATTGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACTCGCCAGTGCCAATGGCCCACGTGCCAGTGTTGGTGGCTATGGCTACTTGCTTCAACCTCTCTGGTGGGTCGGAATGATTACCATGATTGTTGGAGAGATTGCTAATTTTGTAGCCTACATTTATGCCCCTGCTGTTCTTGTTACTCCACTCGGTGCTTTGAGCATTATTGTTAGTGCTGTCTTGGCACATTTTCTCTTGAAGGAGAAGCTGCAGAAAATGGGCATGTTGGGGTGTCTTCTGTGCATTGTGGGATCAACTGTTATTGTGTTGCATGCACCCGAAGAGAAATCTCTTAGTTCTGTACAAGAAATATGGGAATTGGCCATTCAACCTGCATTCCTCTCGTACACTGCCTCAGCAATTGCCGTGACATTGTTCTTGGTTTTGTATTGTGCTCCCCGTCATGGCCAGACTAATATTTTGGTTTATACTGGAATATGCTCGATAGTTGGGTCCTTGACAGTCATGAGTGTAAAAGCAGTTGGCATTGCGATAAAACTTACACTGGAAGGTGCAAACCAGGCTTTCCACTTTCAGGCATGGGTTTTTGCAATGGTTTCTGTCACCTGCATCATTGTCCAACTAAATTACCTTAATATGGACTATTCTGGTCAAAGTATAAGCAGTATTGCATCAGAGCTATGTGGTTTCATCACTATTTTATCTGGAACGACTATATTGCACAGTACAAGAGAGCCAGATCCTCCAGTCGTTGCAGATTTATATACACCATTGTCTCCAAAAGTGTCATGGTATATCCAAGGCAACAGCGAACCCTGGAAACAGGAGGAGGATGTGTCACCCTTGAATTTAATTGCGATTATACGGCAAGACCATTTCAAGTGA 942 0.4437 MSSSNLTGFVLAVLSSAFIGSSFIIKKKGLQLASANGPRASVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGMLGCLLCIVGSTVIVLHAPEEKSLSSVQEIWELAIQPAFLSYTASAIAVTLFLVLYCAPRHGQTNILVYTGICSIVGSLTVMSVKAVGIAIKLTLEGANQAFHFQAWVFAMVSVTCIIVQLNYLNMDYSGQSISSIASELCGFITILSGTTILHSTREPDPPVVADLYTPLSPKVSWYIQGNSEPWKQEEDVSPLNLIAIIRQDHFK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1670 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 123 - -
Gso5g1670 313 PANTHER UNCHARACTERIZED 233 313 IPR008521 GO:0015095|GO:0015693|GO:0016021
Gso5g1670 313 PANTHER UNCHARACTERIZED 1 232 IPR008521 GO:0015095|GO:0015693|GO:0016021
Gso5g1670 313 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 232 - -
Gso5g1670 313 PANTHER MAGNESIUM TRANSPORTER-RELATED 233 313 - -
Gso5g1670 313 Pfam Magnesium transporter NIPA 5 232 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1670 Gso-Chr5 39984574 39988913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1670 K22733 - gmx:100799756 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1670 5 39984574 39988913 Gso5g1670 5 39984574 39988913 ECH
Gso5g1670 5 39984574 39988913 Gso4g1741 4 47505425 47509319 PCT
Gso5g1670 5 39984574 39988913 Gso6g1342 6 13175455 13179180 PCT
Gso4g1741 4 47505425 47509319 Gso5g1670 5 39984574 39988913 PCT
Gso6g1342 6 13175455 13179180 Gso5g1670 5 39984574 39988913 PCT