Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1558 ATGAGGAGAGGAGCTAAGAGAAAGACCAAGCAGGACCAAGAAGCCAAACACGACGCACCCGAAGATAACATGCCCAAAGCTCAGCCTCGAGCTAAACGAGCCAAGACCTCCAAGCCTCAATCCGAACCTGAGTACTTCGAAGACAAGCGCAACTTGGAAGATTTGTGGAAGGAAACATTCCCCGTTGGAACTGAGTGGGATCAATTGGATTCTGTCTATCAATACAAGTGGGATTTCTCAAATCTAGAAAATGCGTTTGAAGAGAATGGCGTGTTGTATGGGAAAAAGGTTTACCTCTTTGGTTGCACTGAGCCTCAATTAGTCATGTTTAAAGGGGAAAGCAAAGTTGTCTGCATACCTGTTGTAGTAGCTGTTGTATCACCTTTCCCACCATCTGATAAAATTGGGATAAACTCAGTTCAAAGAGAGGCTGAAGAGATAATTCCGATGAAGCAAATGAAAATGGACTGGGTTCCATACATTCCCTTGGAGGACAGAGATAGCCAAGTTGATAGACTGAAATCCCAGATATTTATCTTGAGTTGTACCCAAAGAAGGTCTGCTTTAAAACATCTGAAGTTGGATAGATTAAAGAAATATGAGTACTGCTTGCCTTATTTCTATCAGCCATTTAAGGAAGATGAACTTGAACAGAGTACTGAAGTTCAAATAATATATCCAGCTGAGCCAAAGCCGGTCTTCTGTGAATTTGATTGGGAATTAGATGAACTTGAGGAGTTTACTGATAAGCTCATAGAGGAGGAGGAGTTATCAGAAGATCAAAAGGATGCATTTAAGGAATTTGTCAAGGAAAAGGTTCGTGAAGCAAAGAAAGCTAATAGAGAGGCAAGGGAAGCTCGAAAAAAAGCCATTGAAGAAATGAGTGAGGAAACTAAAGCTGCGTTTGAGAGTATGAGATTTTATAAGTTCTACCCTGTTCAATCTCCAGAGGCACCTGATGTATCGAATGTTAAGTCTCCATTCATTAACAGGTATTATGGAAAAGCTCACGAGGTTCTGTGA 1023 0.4106 MRRGAKRKTKQDQEAKHDAPEDNMPKAQPRAKRAKTSKPQSEPEYFEDKRNLEDLWKETFPVGTEWDQLDSVYQYKWDFSNLENAFEENGVLYGKKVYLFGCTEPQLVMFKGESKVVCIPVVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMDWVPYIPLEDRDSQVDRLKSQIFILSCTQRRSALKHLKLDRLKKYEYCLPYFYQPFKEDELEQSTEVQIIYPAEPKPVFCEFDWELDELEEFTDKLIEEEELSEDQKDAFKEFVKEKVREAKKANREAREARKKAIEEMSEETKAAFESMRFYKFYPVQSPEAPDVSNVKSPFINRYYGKAHEVL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1558 340 Coils Coil 244 264 - -
Gso5g1558 340 Gene3D - 2 78 - -
Gso5g1558 340 MobiDBLite consensus disorder prediction 7 47 - -
Gso5g1558 340 MobiDBLite consensus disorder prediction 1 47 - -
Gso5g1558 340 Coils Coil 266 300 - -
Gso5g1558 340 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 1 339 IPR039313 GO:1900034
Gso5g1558 340 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1558 Gso-Chr5 38981095 38986970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1558 - - gmx:100805080 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1558 5 38981095 38986970 Gso8g1191 8 10871327 10876910 GST
Gso5g1558 5 38981095 38986970 Gso4g1841 4 48660717 48666470 PCT
Gso4g1841 4 48660717 48666470 Gso5g1558 5 38981095 38986970 PCT