Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1261 ATGGATCCAGACGCGTTGGCAAAGGCATTCGTGGAGCACTACTACAGCACCTTCGACACCAACCGGAACGGTTTAGCGAATCTGTATCAGGAGGGTTCCATGCTGACCTTCGAAGGGCAGAAGATCCAGGGCGCTTCCAGCATCGTCGCTAAGCTCACTTCCCTCCCTTTCCAGCAGTGCCACCACTCCATCTCCACCGTCGACTGCCAGCCCTCCGGTGTCAACGCTGGCATGCTTGTCTTTGTCAGCGGCAACCTCCAGCTCGCTGGCGAACAGCACACTCTCAAGTTCAGCCAGATGTTCCATTTGATACCAACGCCTCAGGGAAGCTATTATGTGTTGAATGACATATTCCGTTTGAACTATGCATGA 372 0.5376 MDPDALAKAFVEHYYSTFDTNRNGLANLYQEGSMLTFEGQKIQGASSIVAKLTSLPFQQCHHSISTVDCQPSGVNAGMLVFVSGNLQLAGEQHTLKFSQMFHLIPTPQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1261 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Gso5g1261 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Gso5g1261 123 PANTHER NUCLEAR TRANSPORT FACTOR 2B 1 123 - -
Gso5g1261 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Gso5g1261 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Gso5g1261 123 Gene3D - 1 123 - -
Gso5g1261 123 CDD NTF2 2 122 IPR018222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1261 Gso-Chr5 36165562 36168204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1261 - - gmx:100802075 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1261 5 36165562 36168204 Gso8g0875 8 8138843 8140819 GST
Gso13g1576 13 31070529 31071661 Gso5g1261 5 36165562 36168204 PCT
Gso5g1261 5 36165562 36168204 Gso13g1576 13 31070529 31071661 PCT