Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1246 ATGGATTGGCAAGGGCAAAAGCTGGCGGAGCAACTGATGCAGATAATGCTGCTTGCATTTGCTGTGATTGCATTTGTAGGTGGATATGTCATGGCTTCTTTCCAAATGATGATTCTCATATATGCTGGGGGTGTGGTTTTCACCACCTTGCTCACTGTCCCCAATTGGCCCCTTTTCAATCGCCACCCTCTTACGTGGTTGGATCCAAGTGAGGTGGAAAAGCATCCCAAGCCACTACCATCTGCCAATGTAACTCAAAAGAAGAAACCTGTTAAGAAGTAG 282 0.4645 MDWQGQKLAEQLMQIMLLAFAVIAFVGGYVMASFQMMILIYAGGVVFTTLLTVPNWPLFNRHPLTWLDPSEVEKHPKPLPSANVTQKKKPVKK* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1246 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016021
Gso5g1246 93 MobiDBLite consensus disorder prediction 70 93 - -
Gso5g1246 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 89 IPR009542 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1246 Gso-Chr5 35988455 35989545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1246 K12946 - gmx:100797100 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1246 5 35988455 35989545 Gso8g0862 8 8002553 8003748 GST
Gso18g0066 18 575194 576711 Gso5g1246 5 35988455 35989545 PCT
Gso13g1555 13 30920660 30922293 Gso5g1246 5 35988455 35989545 PCT
Gso5g1246 5 35988455 35989545 Gso18g0066 18 575194 576711 PCT
Gso5g1246 5 35988455 35989545 Gso13g1555 13 30920660 30922293 PCT