Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0364 ATGGAGCAATACTGGTCTGGGAGTGCCATCAATGAAAACAAAGGAATGGTAGATAATTTGCATCGTTATGGAGTAATCACATCTAGAAAGGTAGCTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTACCCAGCGGCGGCGGACTCCAACCTTATGTGGACAGTCCTATGCCGATTGGCTACAATGCCACCATCTCTGCGCCGCATATGCATGCCACCTGCCTTCAGTTGCTTGAGAAGAATTTGCAACCTGGAATGCGTGTTCTTGACGTTGGCTCCGGAACGGGATACCTGACAGCATGCTTTGCCTTGATGGTTGGACCCCAAGGCCGTGCTATTGGCGTGGAACATATTCCTGAGTTGGTTTCTTTTTCAATCGAGAATATTCAAAAAAGTGCTGCAGCTCAACCATTGAAAGATGGTTCCCTTTCTGTGCATGCTGGTGATGGAAGGCAAGGTTGGCCTGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCGGCACCCGAAATCCCCCAACCACTTATTGACCAGTTGAAGCCGGGTGGTAGGATGGTTATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTCGTGGATAAGAACTCCGATGGTTCTATCAGTATCCGGACTGAGACTTCTGTTCGATATGTTCCTCTCACTAGCAAAGAAGCTCAACTGCGAGGTTAG 696 0.4713 MEQYWSGSAINENKGMVDNLHRYGVITSRKVAEVMETIDRALFVPSGGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRVLDVGSGTGYLTACFALMVGPQGRAIGVEHIPELVSFSIENIQKSAAAQPLKDGSLSVHAGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISIRTETSVRYVPLTSKEAQLRG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0364 231 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 231 - -
Gso5g0364 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 223 IPR029063 -
Gso5g0364 231 CDD AdoMet_MTases 88 191 - -
Gso5g0364 231 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 12 228 IPR000682 GO:0004719|GO:0036211
Gso5g0364 231 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 226 - -
Gso5g0364 231 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 149 164 IPR000682 GO:0004719|GO:0036211
Gso5g0364 231 Gene3D Vaccinia Virus protein VP39 5 231 IPR029063 -
Gso5g0364 231 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 231 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0364 Gso-Chr5 3812246 3814812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0364 K00573 - gmx:100527082 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0364 5 3812246 3814812 Gso4g1602 4 45666337 45669167 PCT
Gso4g1602 4 45666337 45669167 Gso5g0364 5 3812246 3814812 PCT