Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0288 ATGGGAAATTGCCAAGCCGTTGACACTGCAACTCTAGTGATTCAGCAACCCAATGGGAAAGTAGAAAGGTTGTATTGGCCTGTGAGTGCTAGTGAAGTGATGAAGACCAACCCTGATCACTATGTTGCTCTTCTTATCTCCACCACATTGTGCTCATCCAAGGACAATGAAAATTGCTCGAGTAAGAGTGACAATACCACCAACCCTGTTCGCCTTACCCGCATCAAGCTTCTCAAACCAACTGATACCCTTATGCTTGGCCAAGTTTATAGACTAATCTCAGCTCAAGAGGTTATGAAGGGTCTTTGGGAAAAGAAACAAGCAAAGATGAAGAGAAACTTGTCGGAATCAGCACAAAAGCCAAATCTGATGAAGGAAAGGACAGACAAATCAACAAGGAGGTCCGAGCCGGAGGACAACCAGGAAACCAAAGCTGAAAGACACGGGTCAAGGACAGCATCAACTAATAATGCTTCTAGTGCCACAGCTAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCTCAGAGGCAGCCAGCTGA 543 0.453 MGNCQAVDTATLVIQQPNGKVERLYWPVSASEVMKTNPDHYVALLISTTLCSSKDNENCSSKSDNTTNPVRLTRIKLLKPTDTLMLGQVYRLISAQEVMKGLWEKKQAKMKRNLSESAQKPNLMKERTDKSTRRSEPEDNQETKAERHGSRTASTNNASSATAKSRTWQPSLQSISEAAS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0288 180 Pfam PADRE domain 1 177 IPR025322 -
Gso5g0288 180 MobiDBLite consensus disorder prediction 122 149 - -
Gso5g0288 180 MobiDBLite consensus disorder prediction 110 180 - -
Gso5g0288 180 MobiDBLite consensus disorder prediction 150 180 - -
Gso5g0288 180 PANTHER EXPRESSED PROTEIN 1 180 - -
Gso5g0288 180 PANTHER DUF4228 DOMAIN PROTEIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0288 Gso-Chr5 3007142 3008805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0288 - - gmx:100500500 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0288 5 3007142 3008805 Gso17g0779 17 7233710 7235354 GST
Gso5g0288 5 3007142 3008805 Gso4g1508 4 43926488 43928256 PCT
Gso5g0288 5 3007142 3008805 Gso6g1559 6 16091204 16092996 PCT
Gso4g1508 4 43926488 43928256 Gso5g0288 5 3007142 3008805 PCT
Gso6g1559 6 16091204 16092996 Gso5g0288 5 3007142 3008805 PCT