Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2130 ATGAGCAATCTGAGAACCCTATGTAGACCTCAGACGGTGTTCTCTTTCATTACTTGCAGACACCAATTTCTTTCTAGGGTTTCGTTTCGAAACCCTAATTGCAAGCCCCGTTTGCCATCTTCGTTTCTTTATTCTACAATCGGTTCCTGGGTTTTGAATCCCTGGTTTCGCGTGAAGCAGAGGAGAACCGTGGCCAAGGCAACAAACTGGGCTGAACAAAAATCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGAGGAGCAGATAAAGAATGCTTACAGACGCTTGGCCAAATTCTATCATCCAGATGTCTATGATGGCAGAGGAACACTTGAAGAAGGTGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGGAGAGAGGCGAAGACAGTATGATATGGATAACTGGGTCAACCCCATGAAGGCATCTCAGGCATGGATGGAGTGGCTTATAAAAAAGCGAAAAGCTTTCGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGAGCTAAATCTTCGCGTGCGTCAACTTTCTCGTTCAAAGATTGATCCAGATGAAGCAAGAAGGATTCTGGCAAGAGAAAAAAAGGCTTCGGCTGAATATTACTCGAATACCCTTAAAAGGCACACCCTTGTACTGAAGAAAAGAGATTTGATGCGAAGAAAGGCTGAGGAAGAAAAGAAGAAGACTATCAGCCGGCTCTTGGCAGCAGAAGGTCTTGAGCTTGATGATTCAGATAGTGATGAGGCACTGTAG 807 0.4473 MSNLRTLCRPQTVFSFITCRHQFLSRVSFRNPNCKPRLPSSFLYSTIGSWVLNPWFRVKQRRTVAKATNWAEQKSPYETLELEGDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDGERRRQYDMDNWVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELNLRVRQLSRSKIDPDEARRILAREKKASAEYYSNTLKRHTLVLKKRDLMRRKAEEEKKKTISRLLAAEGLELDDSDSDEAL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2130 268 CDD DnaJ 76 135 IPR001623 -
Gso4g2130 268 PANTHER CO-CHAPERONE PROTEIN DJLA 57 266 - -
Gso4g2130 268 Pfam DnaJ domain 76 143 IPR001623 -
Gso4g2130 268 PRINTS DnaJ domain signature 77 95 IPR001623 -
Gso4g2130 268 PRINTS DnaJ domain signature 95 110 IPR001623 -
Gso4g2130 268 PRINTS DnaJ domain signature 118 138 IPR001623 -
Gso4g2130 268 PRINTS DnaJ domain signature 164 183 IPR001623 -
Gso4g2130 268 SUPERFAMILY Chaperone J-domain 20 142 IPR036869 -
Gso4g2130 268 Gene3D DnaJ domain 60 160 IPR036869 -
Gso4g2130 268 SMART dnaj_3 74 138 IPR001623 -
Gso4g2130 268 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Gso4g2130 268 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
Gso4g2130 268 PANTHER LD30543P 57 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2130 Gso-Chr4 51777290 51780400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2130 - - gmx:100808285 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2130 4 51777290 51780400 Gso4g2130 4 51777290 51780400 ECH