Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2128 ATGGCGGAATGCATTGACGTGAAGCTCTCTCCTGCACCGGACCAAAGGATTCCGTTGATGAGATCAAGAAGAGGACGGCGGCGCGGCGACACGTGGGTGGTGTCGGTGTTCGTCATAATCCAAATCGGTGTTTTCATCGCCACCATGCTCGTCAACGATTGCTGGAACAATTCTCACGGCGATTGCGTTCTCCAACCCCTCGGAAGGTTCTCCTTCCAGCCTCTTCCCGAGAATCCTCTCTTGGGCCCTTCTCAGTCCAAGTTAGATGAAATGGGAGCTCTTCGATGGAACCTTTTGACAGAGCATCATCAAACATGGCGCCTTTTCACATTTCCATTTCTGCATGCTGGACTCTTCCACCTGCTCCTCAATCTCTCCAGTGTCATCTATGTGGGAGTTAACCTAGAGCACCACTTTGGACCCATAAGGATTGGTATAATCTATGCATTGTCTGCCTTTGTGGGTTCCTTGGTGGCTTCTCTTTTTCTCCAAAACATCCCCGCTGTTGGTGCTTCCGGTGCTTTATATGGATTACTGGGAACATTGCTTTCGGAACTTGTTTGGAACTGGAAATTCCATTCCAATAAGATTTCAGCAATAGCATCATTAGTCTTTGTCTTTGTGTGCAACTTCGTCCTTGGTTTTCTGCCTTATGTAGACAATTTTGCAAGCATGGGAGGTTTCATATCAGGATTCCTTCTTGGATCTGTTTTTTTACTATGCCCTCAGATCCAACCTGTAGCTCCAAATAAAGGAGGCCTGATTGATTATGGGGTCAAAAGTTACGTCAAGTTAAAGTTGAAGGAAAAGCTGGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCAGCCTTTTATTGGCTGGTTGTCTTGTGGCTGTTCTTCATGGAATCAACATCAGCAGTTATTGCACATGGTGTCCATATGTCGACTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAACCTCTTGTGAGACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATTGGGAATGGCAATTTCCGAGTATTTCCTTTTACCAACATCTCTCGGGCAAGGTTTAATGATTTGTGCAATCTGATATGCTGA 1107 0.4571 MAECIDVKLSPAPDQRIPLMRSRRGRRRGDTWVVSVFVIIQIGVFIATMLVNDCWNNSHGDCVLQPLGRFSFQPLPENPLLGPSQSKLDEMGALRWNLLTEHHQTWRLFTFPFLHAGLFHLLLNLSSVIYVGVNLEHHFGPIRIGIIYALSAFVGSLVASLFLQNIPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDNFASMGGFISGFLLGSVFLLCPQIQPVAPNKGGLIDYGVKSYVKLKLKEKLDRPVLRIVSLILFSLLLAGCLVAVLHGINISSYCTWCPYVDCIPFTSWHCKDTETSCETMVSNAQLTMTCIGNGNFRVFPFTNISRARFNDLCNLIC* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2128 368 Gene3D - 27 241 IPR035952 -
Gso4g2128 368 SUPERFAMILY Rhomboid-like 29 243 IPR035952 -
Gso4g2128 368 PANTHER RHOMBOID-LIKE PROTEIN 8 12 368 - -
Gso4g2128 368 Pfam Rhomboid family 101 239 IPR022764 GO:0004252|GO:0016021
Gso4g2128 368 PANTHER RHOMBOID-RELATED 12 368 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2128 Gso-Chr4 51768612 51771492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2128 - - gmx:100793747 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2128 4 51768612 51771492 Gso4g2128 4 51768612 51771492 ECH