Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2108 ATGGCTTCTGAGAAGGTTGAGACTGTTGTTGCAGGGAATTACTTAGAAATGGAGAGGGAAGAGGAAGGTTCTAAGTCCACCAGTGGCAAATTGTCTAGGCTCTTTTGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGTTACTGACACTACCATATTCCTTTTCACAACTGGGGATGTTATCTGGGATCATATTTCAGCTTTTTTATGGACTGATGGGAAGCTGGACTGCTTACCTTATCAGTGTCCTTTATGTTGAGTACAGAACCAGAAAGGAGAGAGAAAAAGTTGATTTCAGAAACCATGTTATTCAGTGGTTTGAAGTGCTTGATGGACTTTTGGGCAAACACTGGAGAAATCTTGGTCTTTTTTTCAACTGTACTTTCCTTCTGTTTGGATCAGTAATTCAACTAATTGCTTGTGCAAGTAACATATACTACATAAATGACAATCTGGACAAAAGAACTTGGACTTACATCTTTGGCGCATGCTGTGCAACAACAGTCTTCATCCCTTCTTTCCACAATTACAGAATGTGGTCATTCTTAGGCCTCGTGATGACCACTTACACTGCATGGTATATGACCATAGCTTCCCTTACCCATGGCCAGGCTGAGGGGGTGACGCACACAGGGCCAGCCAAATTGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTATACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTGATCGCAACCCTATATGTGCTGACCCTAACTTTGCCATCGGCATCTGCAGTTTATTGGGCATTTGGGGACCAGCTTCTCACCCATTCCAATGCCCTCTCATTGCTCCCAAGGTCTGGCTTCAGAGATACCGCCGTCATCCTCATGCTCATTCATCAGTTCATAACTTTTGGATTTGCTTGCACTCCTTTATACTTCGTGTGGGAGAAATTCATTGGGGTGCATGAGACCAAGAGTTTGTTCAAAAGAGCTTTGGCTAGACTTCCTGTTGTGATTCCAATATGGTTCCTGGCAATCATATTCCCTTTCTTTGGTCCCATTAACTCAACTGTTGGATCTCTCCTTGTCAGCTTCACTGTTTACATCATTCCTGCTTTGGCTCACATGGTTACCTTTGCTTCAGCACCGGCTAGAGAGAATGCTGTGGAGAGACCACCATCAAAGTTAGGAGGTTGGGTAGGATTGTACTCCATGAACGTGTTTGTGGTGGTATGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCAAGCATGATCAATTTCATACACCAAATTGACACATTTGGGCTATTTGCAAAGTGCTATCAATGTCCCCCTCACAAGGCTTAA 1398 0.4385 MASEKVETVVAGNYLEMEREEEGSKSTSGKLSRLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRMWSFLGLVMTTYTAWYMTIASLTHGQAEGVTHTGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVLTLTLPSASAVYWAFGDQLLTHSNALSLLPRSGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSKLGGWVGLYSMNVFVVVWVLVVGFGLGGWASMINFIHQIDTFGLFAKCYQCPPHKA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2108 465 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Gso4g2108 465 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 460 - -
Gso4g2108 465 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2108 Gso-Chr4 51552336 51555318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2108 1 464 Organic Solute Cotransporters AT1G77690 87.846 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2108 K13946 - gmx:100816267 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2108 4 51552336 51555318 Gso4g2108 4 51552336 51555318 ECH
Gso4g2108 4 51552336 51555318 Gso6g0932 6 8965231 8968252 GST