Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2103 ATGCAGGTCTATGGTAACTGCCCATATATACACATGAGATTCGCACCTTCCTCCAAGTTCTTAGGCTTTTCAAATCTCTTTCACTATCTTATCGCACCCTCTTTCTCTCCGACCCCAAAGTTCTCATCTTCCATTTCCGCTACCATGTCCACTTTTTCCACTCAGAACGACACCGTCATCCACAAAACGCAGCAACCTTTGCAGATCGCAAAGCGCTTAGAAAAATTTCAGACAACAATCTTCACTCAAATGAGCTTGCTTGCCATCAAACATGGAGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCGATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCCGGGGTTATGGAGTTCCAGACCTGAACATTGCCATTGCTGACAGATTTAAGAAAGATACTGGACTTGTGGTAGACCCTGAAAAGGAAATTACTGTCACATCTGGATGCACAGAAGCAATTGCTGCAACTATGATAGGATTAATAAATCCTGGTGATGAGGTTATTATGTTTGCTCCTTTTTATGATTCTTATGAGGCCACTTTGTCCATGGCTGGTGCAAAAGTAAAAGGCATCACTTTGCGCCCTCCAGATTTTGCTGTCCCTCTTGAAGAGTTGAAGTCCACCATCTCGAAGAATACCCGAGCCATTCTTATAAATACTCCTCACAACCCTACTGGAAAGATGTTCACTCGTGAGGAGCTAAATTGCATTGCATCTCTTTGCATCGAGAATGATGTTCTGGTTTTCACTGACGAAGTTTATGATAAGTTGGCTTTTGATATGGATCACATTTCGATGGCCTCTTTGCCTGGAATGTTCGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGTTGGGCCATAGCACCCCCACACTTATCATGGGGAGTGCGACAGGCACACGCCTTCCTCACGTTTGCAACTGCCCATCCTTTTCAGTGTGCTGCTGCAGCAGCTCTGAGAGCACCAGACTCTTACTATGTAGAGCTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAAGGGTTGAAGGCCGTTGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGACGTTGCATTTTGTGAATATCTAGTTAAGGAAGTGGGAGTGGTGGCAATCCCCACCAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTAGTCAGATTTACTTTCTGCAAGGATGAGGATACTATTAGGTCTGCTGTTGAGAGGATGAAAACGAAGCTTATAAAATGA 1353 0.4405 MQVYGNCPYIHMRFAPSSKFLGFSNLFHYLIAPSFSPTPKFSSSISATMSTFSTQNDTVIHKTQQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNIAIADRFKKDTGLVVDPEKEITVTSGCTEAIAATMIGLINPGDEVIMFAPFYDSYEATLSMAGAKVKGITLRPPDFAVPLEELKSTISKNTRAILINTPHNPTGKMFTREELNCIASLCIENDVLVFTDEVYDKLAFDMDHISMASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLSWGVRQAHAFLTFATAHPFQCAAAAALRAPDSYYVELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEDTIRSAVERMKTKLIK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2103 450 CDD AAT_like 94 445 - -
Gso4g2103 450 PANTHER FI04487P 70 448 - -
Gso4g2103 450 SUPERFAMILY PLP-dependent transferases 68 446 IPR015424 -
Gso4g2103 450 Gene3D - 106 344 IPR015421 GO:0003824
Gso4g2103 450 Pfam Aminotransferase class I and II 94 443 IPR004839 GO:0009058|GO:0030170
Gso4g2103 450 Gene3D Aspartate Aminotransferase, domain 1 83 444 IPR015422 GO:0003824
Gso4g2103 450 PANTHER FI04487P 70 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2103 Gso-Chr4 51500414 51502934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2103 K23977 - gmx:100814682 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2103 4 51500414 51502934 Gso4g2103 4 51500414 51502934 ECH