Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2099 ATGGCGAAGGACATCAAGCTCAGCTCTCGAACCCCTCTGCTCTTGCTGTTATGTTTCACCACTCTCACCGAGGCTGTATGGTTAACCATCCCCAGCAAGGGAACCAAGTGCATGTCCGAGGAAATCCAGACACACGTTGTCGTTTTAGCAGATTACTATGTTGTAGCCGATGATGTCCAGGGTCACCAACTTCAAACTATTTCCGCCAAGGTGACATCCCCTTATGGAAATAATCTTCACCAGAATGAAAATGTTACCCACGGTCAGTTTGCATTTACAACTACCGAGTCTGGGAACTACGTGGCATGCTTTTGGGTGAATAACAAACATCAAGAAGGTGGAGGAGAGACCACAATCAGCCTTGAATGGAAAACTGGAATCCATGCCAAAGATTGGGACTCCGTTGCAAGAAAAGAAAAGATAGAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGGGGCTGTGGAAGCCATCCGGGACAATCTAATTTATTTGAAGAATAGGGAAGCAGAGATGAGGGAAGTTAGTGAAACAACGAATGCTAGAGTCGCTTGGTTCAGTATCTTTTCTCTTGGCATCTGCATTTTGGTTTCAGGGTTGCAACTGTGGTTTCTGAAACGATTCTTTCGGAAGAAGAAGCTCATATAG 648 0.4506 MAKDIKLSSRTPLLLLLCFTTLTEAVWLTIPSKGTKCMSEEIQTHVVVLADYYVVADDVQGHQLQTISAKVTSPYGNNLHQNENVTHGQFAFTTTESGNYVACFWVNNKHQEGGGETTISLEWKTGIHAKDWDSVARKEKIEGVELELRKLEGAVEAIRDNLIYLKNREAEMREVSETTNARVAWFSIFSLGICILVSGLQLWFLKRFFRKKKLI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2099 215 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 10 215 - -
Gso4g2099 215 SMART EMP24_GP25L_2 25 210 IPR009038 -
Gso4g2099 215 Coils Coil 141 168 - -
Gso4g2099 215 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 215 IPR015720 -
Gso4g2099 215 ProSiteProfiles GOLD domain profile. 35 150 IPR009038 -
Gso4g2099 215 Pfam emp24/gp25L/p24 family/GOLD 27 210 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2099 Gso-Chr4 51445459 51447409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2099 K20352 - gmx:100500676 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2099 4 51445459 51447409 Gso4g2099 4 51445459 51447409 ECH
Gso4g2099 4 51445459 51447409 Gso6g0942 6 9071166 9073088 GST