Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2090 ATGCCTTCTGCTCCTTCCAAACTCTACGCAGATGACGTGAGCCTCCTCGTTGTGACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTTCCCTTCCCCTTCGCCGAGTTCCTCTCTCAAGTACTCGCTTTTCTCAACACGATCTTGCTCCTAGGCCAGCTCAACCAGGTCATCGTCATCGCCACCGGATGCAACTCTTGCGGCTACGTTTACGATTCCACTTCCGACAAGAACCATGGCTCCACCACTGGTACAATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGACGAGTTTCTCGCTAGGGACCGGCAATTAGACGCCGACGCCTCTCACGCACCGGGAATCGTTCCTTCTTCGCTGTTATCGGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAACAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAACTAGATGCCTCAGCAGCCGACCGGCAAAGAAAGGCTTGA 885 0.4814 MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNTILLLGQLNQVIVIATGCNSCGYVYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRQRKA* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2090 294 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 1 282 IPR004600 GO:0000439|GO:0006289|GO:0006355
Gso4g2090 294 Pfam Transcription factor Tfb4 13 275 IPR004600 GO:0000439|GO:0006289|GO:0006355
Gso4g2090 294 Gene3D von Willebrand factor, type A domain 10 223 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2090 Gso-Chr4 51325517 51333154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2090 K03143 - gmx:100810574 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2090 4 51325517 51333154 Gso4g2090 4 51325517 51333154 ECH
Gso4g2090 4 51325517 51333154 Gso6g0952 6 9176581 9182730 GST