Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2087 ATGCTCAGTTCTTCTTCGGCTTCGTTTTTGAGGCAGTTAAGTGCAAAAAAGGAGGGTTGGAAAGAGAGATACTATAATAGTGGTAGTGGTGGCTGGGGAATGAGCTTTGGAGGGTGTGAGGCAAGTGTGAAACTAATGGAAGGGTTTAACATGCAGGGGAATGTGGGGAGGAAGAGGGTGATGGTGGTGGTTGATGACACCTCACATTCCAAGCATGCAATGTTGTGGGCACTCACTCATGTTGCCAACAAGGGTGATTCCTTGACTCTTCTTCACGTTGTGCCTCCTCACAGGGGTCCTGAATCTTCTTGCTCCACTTATCTTGTCAATTATCTTGGGTCACTTTGCAAAGATTGCAAGCCTGGGGTGGAAGTGGAAGCGCTCTTAATCCAAGGACCAAAACTGGCCACTGTAATGAGCCAAGTAAAGAAGCTGGAGGTCTCTGTCCTGGTACTGGGCCAAAAGAAGCCATCTTCTCTTTTAAGCTGTCTTTGTGGAAGCAGCGGAAGCAGTAGTACAGAGGAGTTTGTGGAGCATTGCATCAATAAAGCAGAGTGCTTGACAATTGGAGTGAGGAAGAGAAGCCAGGGCACGAATGGATACCTTGTCAGCACTAGATGGCAGAAGAACTTCTGGCTTTTGGCTTAG 648 0.4769 MLSSSSASFLRQLSAKKEGWKERYYNSGSGGWGMSFGGCEASVKLMEGFNMQGNVGRKRVMVVVDDTSHSKHAMLWALTHVANKGDSLTLLHVVPPHRGPESSCSTYLVNYLGSLCKDCKPGVEVEALLIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCLCGSSGSSSTEEFVEHCINKAECLTIGVRKRSQGTNGYLVSTRWQKNFWLLA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2087 215 CDD USP_Like 59 154 - -
Gso4g2087 215 Pfam Universal stress protein family 57 168 IPR006016 -
Gso4g2087 215 Gene3D HUPs 57 194 IPR014729 -
Gso4g2087 215 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 58 167 - -
Gso4g2087 215 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 215 - -
Gso4g2087 215 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2087 Gso-Chr4 51303167 51304818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2087 - - gmx:100810043 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2087 4 51303167 51304818 Gso4g2087 4 51303167 51304818 ECH
Gso4g2087 4 51303167 51304818 Gso6g0955 6 9207277 9208908 GST