Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2085 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCTAGCAGTTATTCCGTGGATTTGAAGAAAGACCTTTTCCTCCAATTGCAGAGTCAAAGTTTAAGGCCTAAGTTCTCTCAGCTCTCATTCAACCCACTTCCATCATCAACTTCTTCCTTTTCTTCACCCCGTACATTCACAACTCTGGCCCTCTTCAAATCTAAGACCAAAGCCGCTCCTGCTAAGACTAAGGTTACAAAGCCAAAGCAAAAGGTTGAAGATGGTATCTTTGGCACTTCTGGAGGATTTGGTTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCTATGCTTGGTTTTGCAGCATCACTGTTGGGTGAAGGAATAACTGGGAAAGGAATTCTAGCACAATTGAATCTGGAAACTGGAATTCCCCTTTATGAAGCGGAGCCTCTTCTTCTGTTTTTCATCCTCTTCACCCTGCTAGGAGCCATTGGAGGTTTAGGTGACCGTGGAAAATTTGTTGATGACGAACCTACTACTGGAGGTGTTATTCCTCCAGGCAAAGGCTTCAGGGAAGCTCTTGGTCTTGGTTCAGGTCCTTTATTTGGATTCACGAAAGCAAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGTTTCGTTTTCTCATTGATTGGAGAAATTATAACCGGAAAGGGAGCACTAGCCCAACTCAACATTGAGACTGGGGTACCAATCAACGAAATCGAGCCCCTAGTGTTGTTCAATGTTCTTTTCTTCTTCATTGCTGCTTTGAATCCTGGAACTGGCAAATTCGTTACAGATGAGGGGGAGGATGATTAG 822 0.4416 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPSSTSSFSSPRTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPLYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPTTGGVIPPGKGFREALGLGSGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDEGEDD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2085 273 Gene3D Chlorophyll a/b binding protein domain 138 243 - -
Gso4g2085 273 PANTHER PHOTOSYSTEM II SUBUNIT S 194 258 - -
Gso4g2085 273 PANTHER PHOTOSYSTEM II SUBUNIT S 1 184 - -
Gso4g2085 273 Gene3D Chlorophyll a/b binding protein domain 53 137 - -
Gso4g2085 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 184 - -
Gso4g2085 273 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 194 258 - -
Gso4g2085 273 Pfam Chlorophyll A-B binding protein 66 217 IPR022796 -
Gso4g2085 273 SUPERFAMILY Chlorophyll a-b binding protein 82 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2085 Gso-Chr4 51264616 51266211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2085 K03542 - gmx:100807355 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2085 4 51264616 51266211 Gso4g2085 4 51264616 51266211 ECH
Gso4g2085 4 51264616 51266211 Gso6g0959 6 9256858 9258538 GST