Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2083 ATGCGAGTGGCGCGAGAAGAAGCAATGGGTGGTGGAAAGCGGAACACGGTGGAGACATTCTTCTTAGCCACTCTCATTCTCTGGCTCGCTTCCCTTTGTTTCCAGATTTTGTTGAACAAGCGCTGGGAGCTTCTCTCTGTCATCGCGGGTTCTATCTTCTACCAGACATCTAACTGCCTCATCCGATTCTTCTCCACACATAAAGACAAAGACGCTCTCTTCGTTAACACCTCCGTCTCTCTTCTCCACTCTCTCCTCACCTCCTCCTCAGTGATCTTCATCTTGTTCAGAGAGTTGTTAAGTAATGGGCCAAGTGGAATGTCTGACCACTCACAGTTGGTCGAAGATGCTTGGTCATGGGCATTTGAAGCGTTGAGCTTTTCTTGTGGTTACTTTGCATATGATCAGTGGGATATGCTTCATTACCGATTGTATAATGGTTGGATCCCCTCTATCCTTGTGCATCATCTGGTTCTCCTTATTTGCTTCACTCTTGCTTTGTATCGAAATGTTACCATCAACTACCTTATTCTCACTCTTATCTGTGAGCTGCATTCCATCTTTCTTCATTTGAGAAAAGTGAGACGAATGGCCGGTATTCGGGATGCAAAGAGCATTCTTGTTAAGTTAGAATGGTTTTTGAATTGGGTTACCTTCTTTGTGGCAAGATCTGTACCTCACGTTCTCATCACAGCCAAGCTCATCAAGGATGCATACAAATTTGAAAAGGGTATGGAGCTACCACTGGCTCTGTTGGGCATGGCTGGGATGAATTTGCTCAACATTGGTCTTGGCATTGATCTCCTTAAAGCTTTTAAGAGAGAGAGGAAGTCTCAGCAGGGTAATCTTCATCATCACCGTGAATGA 867 0.4487 MRVAREEAMGGGKRNTVETFFLATLILWLASLCFQILLNKRWELLSVIAGSIFYQTSNCLIRFFSTHKDKDALFVNTSVSLLHSLLTSSSVIFILFRELLSNGPSGMSDHSQLVEDAWSWAFEALSFSCGYFAYDQWDMLHYRLYNGWIPSILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHLRKVRRMAGIRDAKSILVKLEWFLNWVTFFVARSVPHVLITAKLIKDAYKFEKGMELPLALLGMAGMNLLNIGLGIDLLKAFKRERKSQQGNLHHHRE* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2083 288 ProSiteProfiles TLC domain profile. 69 286 IPR006634 GO:0016021
Gso4g2083 288 Pfam TLC domain 74 262 IPR006634 GO:0016021
Gso4g2083 288 PANTHER TLC DOMAIN-CONTAINING PROTEIN FLD-1 20 282 - -
Gso4g2083 288 PANTHER CT120 PROTEIN 20 282 - -
Gso4g2083 288 SMART lag1_27 69 274 IPR006634 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2083 Gso-Chr4 51252910 51255505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2083 - - gmx:100806828 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2083 4 51252910 51255505 Gso4g2083 4 51252910 51255505 ECH
Gso4g2083 4 51252910 51255505 Gso6g0961 6 9268115 9288073 GST