Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2082 ATGAACGCTATTGCAACTGCTGCAGTTCTCTCTCTCCCTTTCTCCTTCTCCAAATCATCCAAACTTGACACCAAAAAGGGTTTAAAAGGAAGGTTTAGAGTGTTTGCTGTATATGGAGAAGAGATAGATAAGAAGAATGCATGGAGTGCCCTCTTTGATGTGGAGGATCCACGATCTAAAGTGCCGCAGTATAAAGGGAAGTTTTTGGATGTATATCAAGCCCTTGAAGTTGCAAGATATGATATTCAATACTGTGATTGGCGAGCTAGGCAAGACTTGCTTACCATCATGCTTCTTCATGAAAAGGTGGTGGAGGTTCTTAATCCTTTAGCTCGTGATTATAAGTCCATTGGCACCATGAAAAAGGAGCTAGCAGAGTTGCAGGAAGAATTGGCACAAGCACACCAACAGGTTCATATATCTGAGGCAAGGGTGTCCAGTGCTTTAGATAAACTAGCTTACATGGAAGAATTAGTAAACGATAAGTTGTTGCAAGAAAGAAGCACAACAGAAGTTTCCCAGACATCCTCTTCTCCCAGTACTTCTTTTAAACCTGTAGATATAGAAAAGAGAAGATCGCCACGAAAAAGCTTGGACATATCAGGTCCAGTTCAGTCATACCATCCACACTTGAAGAATTTCTGGTACCCTGTAGCTTTCTCTACTGACTTGAAGGATGATACAATGATCCCAATAGAATGTTTTGAGGAACCATGGGTCATCTTCCGAGGGAAAGATGGGAAGCCTGGGTGTGTTCAGAACACCTGTGCACACAGAGCATGTCCTCTACACCTTGGTTCGGTGAATGAGGGTCGTATCCAATGCCCTTACCATGGCTGGGAATATACTACTGATGGAAAATGTGAGAAAATGCCGTCTACTCGACTGCTAAATGTGAAGATAAAGTCATTGCCATGTTTTGAAACAGAGGGGATGATCTGGGTTTGGCCTGGCAATGACCCCCCGACGGCTACCCTTCCATCTTTGCTACCTCCATCTGGGTTTGAAGTGCATGCTGAGATTGTCATGGAGCTTCCCATCGAACACGGGTTACTTTTGGACAACCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCAACTTTTGCTAAGGGATGGAGTGTTCCCAGCTTGGTGAAATTTTTGACAGCATCTGGCCTACAAGGATACTGGGACCCCTATCCAATTGATATGGAGTTTCGGCCACCTTGCATGGTTCTATCAACCATTGGAATTTCGAAGCCTGGTAAACTGGAAGGACAAAGCACCAGTCAGTGTGCCACACACCTGCACCAACTTCATGTCTGCTTACCATCTTCAAAACAAAAAACAAGATTGCTGTACAGAATGTCACTGGATTTTGCTCCTGTGCTTAAGCATATTCCTTTTATGCAACATCTATGGAGATATTTTGCAGAGCAGGTTTTAAACGAGGATCTACGGCTAGTGTTAGGCCAGCAAGAGCGGATGAACAATGGTGCCAATGTGTGGAATTTCCCAGTATCCTATGACAAGCTTGGGATAAGGTACAGACTATGGAGAAATGCCTTGGAGCGAGGAAATAAGCAACCACCCTTCAGCAAATAG 1590 0.4403 MNAIATAAVLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEEIDKKNAWSALFDVEDPRSKVPQYKGKFLDVYQALEVARYDIQYCDWRARQDLLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEELAQAHQQVHISEARVSSALDKLAYMEELVNDKLLQERSTTEVSQTSSSPSTSFKPVDIEKRRSPRKSLDISGPVQSYHPHLKNFWYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFETEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQERMNNGANVWNFPVSYDKLGIRYRLWRNALERGNKQPPFSK* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2082 529 Coils Coil 117 144 - -
Gso4g2082 529 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 70 529 - -
Gso4g2082 529 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 70 529 - -
Gso4g2082 529 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 256 278 IPR015881 GO:0005506|GO:0051537
Gso4g2082 529 MobiDBLite consensus disorder prediction 166 201 - -
Gso4g2082 529 SUPERFAMILY Bet v1-like 311 522 - -
Gso4g2082 529 CDD Rieske_RO_Alpha_Cao 198 326 - -
Gso4g2082 529 MobiDBLite consensus disorder prediction 166 184 - -
Gso4g2082 529 Gene3D - 337 524 - -
Gso4g2082 529 Pfam Rieske [2Fe-2S] domain 215 296 IPR017941 GO:0051537
Gso4g2082 529 SUPERFAMILY ISP domain 210 320 IPR036922 GO:0051537
Gso4g2082 529 Gene3D - 209 331 IPR036922 GO:0051537
Gso4g2082 529 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 215 315 IPR017941 GO:0051537
Gso4g2082 529 Pfam Pheophorbide a oxygenase 401 496 IPR013626 GO:0010277
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2082 Gso-Chr4 51246705 51251253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2082 K13600 - gmx:100806298 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2082 4 51246705 51251253 Gso4g2082 4 51246705 51251253 ECH