Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2071 ATGGCGGGTAGGGTTTCGACGTGCTTCTTCTTCGTGTTTGCTCTTTCTCTCCTTCTTCCTTTTCAGATCTCCGCTGAGGAATCATCGGAGAAAGAGTTCGTACTCACATTGGATCACTCTAACTTTCATGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTCTACGCTCCATGGTGTGGCCACTGTAAGAAGCTTGCTCCCGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAATTGATGCCAATGAGGAGAAGAACAAAGACCTTGCATCTCAATATGATGTTAGGGGATACCCAACAATTAAGATTCTGAGAAATGGGGGAAAGAATGTTCAGGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGTTGACTATTTGAAGAAACAAAGTGGTCCTGCTTCAACTGAAATTAAATCTGCTGATGAAGCTACTGCTTTCATTGGTGAAAATAAAGTTGCTATTGTTGGAGTTTTCCCGAAATTTTCTGGAGAGGAGTTTGACAACTTTTCTGCCTTAGCAGAGAAGTTGCGTTCTGACTATGACTTCGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAGTCATCAGTTTCTGGTCCCGTAGTTAGGTTGTTCAAGCCATTCGATGAACTTTTTGTTGACTTCCAGGATTTCAATGTGGAAGCTCTAGAGAAATTTGTTGAGGAATCTAGTACCCCTGTTGTTACTGTCTTTAACAATGATCCGAGCAATCACCCTTTCGTTGCCAAATTCTTCAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAACATAAACAACAGGGTGTAAGCTTTTTGGTGGGAGATGTTGAGTCTAGTCAAGGTGCTTTCCAGTATTTTGGACTGAAAGAAGAACAAGTACCTCTAATTATCATTCAACACAATGACGGGAAAAAGTTTTTTAAACCCAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCGTACAAGGATGGTAATGTTGCACCATTTGTGAAGTCTGAACCCATTCCTGAAGCTAACGATGAACCTGTTAAAGTGGTAGTTGGGAACAGTCTTGAGGACATTGTTTTCAAATCTGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCCTGGTGTGGTCATTGCAAACAGTTGGCTCCAATATTGGACGAAGTTGCTATCTCATATCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAAGTGAAACCTTTGATGTCCAAGGTTATCCAACCGTGTACTTCAGGTCAGCAAGTGGAAAGTTATCACAATACGAAGGGGGTAGGACCAAGGAAGACATCATAGAATTCATCGAAAAGAACCGGGACAAACCTGCTCAGCAAGAACAAGGACAAGATAAACCTGCTCAGCAAGAACAAGGACAAGATGAGCAAGAAAAAGGAAAAGATGAGCTTTGA 1542 0.4248 MAGRVSTCFFFVFALSLLLPFQISAEESSEKEFVLTLDHSNFHDTVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKIDANEEKNKDLASQYDVRGYPTIKILRNGGKNVQEYKGPREADGIVDYLKKQSGPASTEIKSADEATAFIGENKVAIVGVFPKFSGEEFDNFSALAEKLRSDYDFGHTLNAKHLPRGESSVSGPVVRLFKPFDELFVDFQDFNVEALEKFVEESSTPVVTVFNNDPSNHPFVAKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQHKQQGVSFLVGDVESSQGAFQYFGLKEEQVPLIIIQHNDGKKFFKPNLEADHIPTWLKAYKDGNVAPFVKSEPIPEANDEPVKVVVGNSLEDIVFKSGKNVLLEFYAPWCGHCKQLAPILDEVAISYQSDADVVIAKLDATANDIPSETFDVQGYPTVYFRSASGKLSQYEGGRTKEDIIEFIEKNRDKPAQQEQGQDKPAQQEQGQDEQEKGKDEL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2071 513 SUPERFAMILY Thioredoxin-like 244 375 IPR036249 -
Gso4g2071 513 SUPERFAMILY Thioredoxin-like 345 483 IPR036249 -
Gso4g2071 513 CDD PDI_a_PDI_a'_C 377 479 - -
Gso4g2071 513 CDD PDI_b_family 146 242 - -
Gso4g2071 513 Pfam Thioredoxin 34 140 IPR013766 -
Gso4g2071 513 Pfam Thioredoxin 379 481 IPR013766 -
Gso4g2071 513 MobiDBLite consensus disorder prediction 480 513 - -
Gso4g2071 513 TIGRFAM ER_PDI_fam: protein disulfide isomerase 34 513 IPR005792 GO:0003756
Gso4g2071 513 Pfam Thioredoxin-like domain 170 353 - -
Gso4g2071 513 TIGRFAM pdi_dom: protein disulfide-isomerase domain 38 141 IPR005788 GO:0003756
Gso4g2071 513 TIGRFAM pdi_dom: protein disulfide-isomerase domain 383 482 IPR005788 GO:0003756
Gso4g2071 513 Gene3D Glutaredoxin 247 372 - -
Gso4g2071 513 CDD PDI_b'_family 263 357 - -
Gso4g2071 513 PRINTS Thioredoxin family signature 52 60 - -
Gso4g2071 513 PRINTS Thioredoxin family signature 60 69 - -
Gso4g2071 513 PRINTS Thioredoxin family signature 105 116 - -
Gso4g2071 513 ProSitePatterns Thioredoxin family active site. 398 416 IPR017937 -
Gso4g2071 513 Gene3D Glutaredoxin 373 486 - -
Gso4g2071 513 ProSiteProfiles Thioredoxin domain profile. 356 484 IPR013766 -
Gso4g2071 513 Gene3D Glutaredoxin 142 246 - -
Gso4g2071 513 ProSiteProfiles Thioredoxin domain profile. 12 143 IPR013766 -
Gso4g2071 513 PANTHER PROTEIN DISULFIDE-ISOMERASE 6 502 - -
Gso4g2071 513 SUPERFAMILY Thioredoxin-like 147 246 IPR036249 -
Gso4g2071 513 CDD PDI_a_family 35 138 - -
Gso4g2071 513 SUPERFAMILY Thioredoxin-like 34 144 IPR036249 -
Gso4g2071 513 PANTHER PROTEIN DISULFIDE ISOMERASE 6 502 - -
Gso4g2071 513 Gene3D Glutaredoxin 22 141 - -
Gso4g2071 513 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2071 Gso-Chr4 51147756 51152000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2071 K09580 - gmx:100170705 1026.16