Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2069 ATGGCAATGGCTTCTTCAATCCCTAATGCGCCTTCTGCGTTCAATTCTCAGAGCTACGTTGGTCTCAGAGCGCCACTGAGGACCTTCAACTTTTCTTCTCCTCAAGCTGCCAAAATTCCTCGCTCCCAACGCCTTTTCGTCGTCAGAGCCTCCGATTCGGAGTTCGAAGCCGCCGTTGTCGCCGGTAAGGTTCCGCCGGCGCCTCCCGTGCCGCCCAGACCGGCGGCTCCGGTTGGAACACCGGTGGTTCCTTCACTTCCACTTCACCGGCGTCCTCGTCGGAACCGGAAGTCGCCGGCGCTTCGGTCGGCTTTTCAGGAAACGAGCATTTCGCCGGCGAATTTCGTGTATCCGCTTTTCATTCACGAAGGTGAAGAGGATACTCCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGGTGGAGGCATGGACTTGTAGAAGAGGTTGCAAAAGCACGGGATGTTGGTGTTAATAGTGTTGTGCTCTTCCCCAAAATTCCAGATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGAAAATGGTTTAGTGCCTCGAACAATACGTTTGCTCAAGGATAAGTACCCAGACCTTGTTATCTATACAGATGTTGCATTAGATCCTTATTCATCAGATGGGCATGATGGCATAGTTAGAGAAGATGGAGTTATTATGAATGATGAGACAGTTCATCAGCTATGTAAACAAGCTGTAGCCCAGGCCCAAGCTGGAGCAGATGTTGTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCACTGCGTGCAGCTCTGGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCCTATACAGCAAAGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCACTAGACTCAAACCCCCGGTTTGGAGACAAGAAAACTTATCAGATGAACCCAGCTAATTACAGAGAGGCTCTGACTGAGATGCGGGAGGATGAATCTGAAGGAGCTGACATTCTCTTGGTGAAGCCTGGTCTTCCTTACTTGGATATCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATACCAGGTTTCTGGTGAATATGCAATGATAAAGGCTGCCGGTGCTCTCAAAATGATAGACGAAGAAAAGGTTATGATGGAGTCACTGATGTGCCTCCGAAGGGCCGGTGCTGATATCATCCTCACATATTCTGCTCTGCAAGCTGCCAAATGTTTGTGTGGAGAGAAGAGGTGA 1245 0.4908 MAMASSIPNAPSAFNSQSYVGLRAPLRTFNFSSPQAAKIPRSQRLFVVRASDSEFEAAVVAGKVPPAPPVPPRPAAPVGTPVVPSLPLHRRPRRNRKSPALRSAFQETSISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKIPDALKSPTGDEAYNENGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQAQAGADVVSPSDMMDGRVGALRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYAMIKAAGALKMIDEEKVMMESLMCLRRAGADIILTYSALQAAKCLCGEKR* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2069 414 Gene3D Aldolase class I 80 414 IPR013785 -
Gso4g2069 414 MobiDBLite consensus disorder prediction 72 103 - -
Gso4g2069 414 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 12 413 - -
Gso4g2069 414 Pfam Delta-aminolevulinic acid dehydratase 90 407 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 PRINTS Delta-aminolevulinic acid dehydratase signature 207 221 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 PRINTS Delta-aminolevulinic acid dehydratase signature 238 257 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 PRINTS Delta-aminolevulinic acid dehydratase signature 276 295 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 PRINTS Delta-aminolevulinic acid dehydratase signature 328 344 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 PRINTS Delta-aminolevulinic acid dehydratase signature 353 368 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 PRINTS Delta-aminolevulinic acid dehydratase signature 383 402 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 328 340 IPR030656 -
Gso4g2069 414 CDD ALAD_PBGS_aspartate_rich 90 410 - -
Gso4g2069 414 SMART ALAD_2 87 409 IPR001731 GO:0004655|GO:0033014|GO:0046872
Gso4g2069 414 SUPERFAMILY Aldolase 85 410 - -
Gso4g2069 414 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 12 413 IPR001731 GO:0004655|GO:0033014|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2069 K01698 - gmx:548095 766.533