Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2068 ATGAAGAAAATCCGCAACTCCATCCTACTCTTATCAATCTTTCTGGCAGCCTCGTCGGCGGTTTCATCCGCGGAGCCGATTCCTTCCGCCGCCTACGACCGCGTGCTTTTCCCGGACCGCCGATGCCAGAAGACGGTGTCGGAGAACAAGACGCGACGAGGATCCTCTGCGGCAGCGGCGGCGGGGTGTGAGGTGTGGAGCGAGTCGTGTTCGGAGGCGGTGCTGAGCGTGGCCCGGCGCGCGGAGACGGCGGAGTGGTTGAAGAATATTCGGCGGAAGATCCACGCGAATCCGGAGCTGGCGTTTGAGGAAATCGAGACGAGTCGTTTGATAAGGGAGGAGTTGGATCTTATGGAAGTTAGTTATCGGTACCCTCTCGCCAAGACCGGTATTCGAGCCTGGATCGGCACGGGGGGTCCGCCTTTTGTTGCGATCAGAGCTGACATGGACGCACTTCCCATCCAAGAAGCTGTGGAATGGGAGTACAAATCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTTATCGGCGCTGCCAAGATTTTGAAAACTCGAGAGCATTTATTAAAGGGAACTGTAATTCTGTTATTCCAGCCAGCAGAGGAAGCTGGTAATGGAGCAAAACGAATGATGCAAGACGGTGCTTTGGAGGACGTTGAGGCTATATTTGCAGCTCATGTATCCCATGAGCATCCAACTGGTATAATTGGATCCAGGCGTGGACCCCTCCTTGCAGGTTGTGGATTTTTCAGAGCTGTCATTAGTGGCAAAAAGGGCCTTGCTGCCGATCCTCATCGTTCTGTTGATCCAGTTTTGGCTGCTTCAGCTGCAGTTATTAGCTTACAGGGTATTGTCTCCCGCGAAGCAAATCCATTGGATTCTCAGGTTGTCTCTGTGACTTCGTTTAATGGAGGCAACAAGCTTGACATGATACCCGACACAGTGGTCCTATTGGGGACTTTCAGAGCGTTCTCTAACACCAGCTTTTACCAGCTACTTGAAAGAATAGAGCAGGTGATTGTGGAACAGGCTAGTGTCTACAGATGCTTGGCAGAAGTTGACTTCTTTGAAAAGGAGTACACTATTTACCCTCCCACAGTTAATGATGACCGAATGTATGAGCATGTGAAGAAGGTGTCCATTGATTTGCTGGGTCACAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTCTCTTTCTACTCCGAGATGGTTCCCTCAGCTTTCTTCTACATAGGAGTAAGGAATGAAACATTGGGGTCTACTCATACGGGACATTCTCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTGCTCATGCTAGTATTGCAGAGAGGTACCTCATTGAGCATGGTTGA 1401 0.5018 MKKIRNSILLLSIFLAASSAVSSAEPIPSAAYDRVLFPDRRCQKTVSENKTRRGSSAAAAAGCEVWSESCSEAVLSVARRAETAEWLKNIRRKIHANPELAFEEIETSRLIREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMMQDGALEDVEAIFAAHVSHEHPTGIIGSRRGPLLAGCGFFRAVISGKKGLAADPHRSVDPVLAASAAVISLQGIVSREANPLDSQVVSVTSFNGGNKLDMIPDTVVLLGTFRAFSNTSFYQLLERIEQVIVEQASVYRCLAEVDFFEKEYTIYPPTVNDDRMYEHVKKVSIDLLGHKNFRVVPPMMGAEDFSFYSEMVPSAFFYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAAHASIAERYLIEHG* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2068 466 CDD M20_IAA_Hyd 87 462 IPR044757 GO:0009850|GO:0016787
Gso4g2068 466 Gene3D - 252 370 - -
Gso4g2068 466 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 34 465 - -
Gso4g2068 466 Gene3D Zn peptidases 89 447 - -
Gso4g2068 466 SUPERFAMILY Bacterial exopeptidase dimerisation domain 253 362 IPR036264 -
Gso4g2068 466 TIGRFAM amidohydrolases: amidohydrolase 89 450 IPR017439 GO:0016787
Gso4g2068 466 PANTHER PEPTIDASE M20 FAMILY MEMBER 34 465 IPR017439 GO:0016787
Gso4g2068 466 Pfam Peptidase family M20/M25/M40 144 459 IPR002933 GO:0016787
Gso4g2068 466 Pfam Peptidase dimerisation domain 257 351 IPR011650 -
Gso4g2068 466 PIRSF Amidohydrol_AmhX 75 465 IPR017439 GO:0016787
Gso4g2068 466 SUPERFAMILY Zn-dependent exopeptidases 81 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2068 Gso-Chr4 51120262 51128217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2068 K21604 - gmx:100800794 884.404