Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2066 ATGGTGAAGGTGTGGTGGTGTTTTTCCTTTGCTTTCATTTTAATTAGGGTGTTTATTGGTGCCGTCTATGGTGACAATGTCACCTACGACGGAAGATCCTTAATCATTGATGGCCAACATAAAATCCTTTTCTCCGGTTCAATTCATTATCCTCGTAGCACTCCTCAGATGTGGCCTAATTTAATTGCCAAAGCTAAGGAAGGTGGATTAGATGTCATACAAACTTATGTGTTTTGGAACCTTCACGAACCTCAACAAGGCCAGTATGACTTTCGAGGAATGCGTAATATAGTGAGATTCATTAAGGAAATTCAAGCACAAGGTTTATATGTAACCCTCCGAATTGGACCATACATTGAGAGTGAATGTACATATGGGGGTCTACCGTTATGGTTACATGATATTCCGGGTATCGTATTCAGATCTGACAATGAGCAATTCAAGATTGAGAACGAGTATGGGAACGTTGAAGGGGCATTTCACGAGAAAGGACTGTCCTATATTCGTTGGGCTGCCCAAATGGCCGTGGGGCTCCAAACTGGTGTGCCTTGGGTAATGTGCAAGCAAGATAATGCTCCTGATCCGGTGATCAACACATGCAATGGCATGCAGTGTGGAAAAACTTTCAAGGGCCCTAACTCGCCTAACAAGCCTTCACTATGGACAGAGAATTGGACAAGTTTTTACCAAGTCTTTGGTGAAGTACCATACATAAGATCAGCTGAAGACATTGCATACAATGTTGCCTTGTTCATTGCAAAAAGAGGAAGCTATGTCAATTACTACATGTACCATGGAGGAACCAATTTCGACAGAATAGCCTCTGCTTTCGTAGTAACGGCATATTATGACGAAGCTCCACTTGATGAATATGGTTTGGTTAGGGAACCAAAATGGGGACATCTTAAGGAGCTTCATGAAGCAATCAAGTCATGTTCAAATTCTCTACTTTATGGAACTCAAACTAGCTTCAGCTTGGGCACACAACAAAACGCTTATGTTTTCAGAAGAAGCTCAATAGAATGTGCTGCCTTCCTGGAAAATACTGAAGATCGGAGTGTCACAATCCAATTTCAAAATATTCCATATCAATTACCCCCCAATTCAATCAGTATTCTACCAGACTGCAAGAATGTAGCCTTCAACACTGCCAAGGTACGCGCACAAAATGCCAGAGCAATGAAATCGCAGTTACAGTTCAATTCAGCTGAAAAATGGAAAGTGTACAGAGAAGCCATCCCCAGCTTTGCTGATACTTCATTAAGAGCAAACACATTATTAGATCAAATCAGCACAGCAAAAGATACATCTGACTATTTGTGGTACACATTCAGGCTTTATGACAACTCTGCCAATGCTCAATCCATTCTTAGTGCATACAGCCACGGACATGTTTTGCATGCCTTCGTCAATGGAAATTTAGTAGGTTCTAAACACGGAAGTCACAAAAATGTATCCTTTGTCATGGAGAACAAACTCAATCTTATAAGCGGGATGAACAATATTTCTTTCCTCAGTGCAACAGTTGGATTGCCGAACTCGGGAGCATATCTAGAGGGCAGAGTTGCTGGCTTGCGTAGTCTGAAAGTTCAAGGCAGAGATTTCACTAATCAAGCATGGGGATATCAGGTTGGGTTGCTAGGAGAAAAATTGCAAATCTACACAGCTAGTGGATCAAGTAAAGTTAAGTGGGAAAGTTTCCTAAGCTCTACTAAGCCACTCACATGGTATAAGACCACATTTGATGCACCAGTGGGTAACGATCCAGTAGTGCTTAACCTTGGTTCAATGGGAAAGGGATATACTTGGGTTAATGGTCAAGGTATCGGTCGATATTGGGTATCTTTCCACACACCACAGGGAACACCTTCACAGAAATGGTATCATATACCCCGATCCCTCCTAAAATCTACTGGGAACCTACTAGTTCTACTAGAAGAGGAAACTGGGAACCCACTAGGGATCACTCTAGACACAGTTTACATCACATCACAGTGA 1998 0.4194 MVKVWWCFSFAFILIRVFIGAVYGDNVTYDGRSLIIDGQHKILFSGSIHYPRSTPQMWPNLIAKAKEGGLDVIQTYVFWNLHEPQQGQYDFRGMRNIVRFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDIPGIVFRSDNEQFKIENEYGNVEGAFHEKGLSYIRWAAQMAVGLQTGVPWVMCKQDNAPDPVINTCNGMQCGKTFKGPNSPNKPSLWTENWTSFYQVFGEVPYIRSAEDIAYNVALFIAKRGSYVNYYMYHGGTNFDRIASAFVVTAYYDEAPLDEYGLVREPKWGHLKELHEAIKSCSNSLLYGTQTSFSLGTQQNAYVFRRSSIECAAFLENTEDRSVTIQFQNIPYQLPPNSISILPDCKNVAFNTAKVRAQNARAMKSQLQFNSAEKWKVYREAIPSFADTSLRANTLLDQISTAKDTSDYLWYTFRLYDNSANAQSILSAYSHGHVLHAFVNGNLVGSKHGSHKNVSFVMENKLNLISGMNNISFLSATVGLPNSGAYLEGRVAGLRSLKVQGRDFTNQAWGYQVGLLGEKLQIYTASGSSKVKWESFLSSTKPLTWYKTTFDAPVGNDPVVLNLGSMGKGYTWVNGQGIGRYWVSFHTPQGTPSQKWYHIPRSLLKSTGNLLVLLEEETGNPLGITLDTVYITSQ* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2066 665 Pfam Glycosyl hydrolases family 35 33 148 IPR031330 -
Gso4g2066 665 Gene3D Glycosidases 148 313 - -
Gso4g2066 665 SUPERFAMILY Galactose-binding domain-like 539 662 IPR008979 -
Gso4g2066 665 Gene3D Glycosidases 21 147 - -
Gso4g2066 665 PANTHER BETA-GALACTOSIDASE RELATED 8 149 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 PANTHER BETA-GALACTOSIDASE RELATED 148 663 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 Pfam Beta-sandwich domain in beta galactosidase 316 386 IPR041392 -
Gso4g2066 665 PANTHER BETA-GALACTOSIDASE 8 149 - -
Gso4g2066 665 PANTHER BETA-GALACTOSIDASE 148 663 - -
Gso4g2066 665 SUPERFAMILY Galactose-binding domain-like 370 524 IPR008979 -
Gso4g2066 665 Gene3D - 540 663 - -
Gso4g2066 665 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 PRINTS Glycosyl hydrolase family 35 signature 572 586 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 PRINTS Glycosyl hydrolase family 35 signature 599 615 IPR001944 GO:0004553|GO:0005975
Gso4g2066 665 SUPERFAMILY (Trans)glycosidases 24 312 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2066 Gso-Chr4 51083540 51092839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2066 8 663 Glycoside Hydrolase AT5G63800 56.633 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2066 - - gmx:100780980 1358.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2066 4 51083540 51092839 Gso4g2066 4 51083540 51092839 ECH