Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2054 ATGTTGGCACGCAGTCTCTGCACGTGTCACATGGTGTTCTCCGTCGACCGGATCACTCCCACCTTCGTGTCTGTGTTTTCTGGCAACGCCAGAGTGTTGGCTTTCCGCTTCCAATTGCGGAGGAACACACACCTCGTCACCGCCCAACTTTCCAACTCTTTCTCCTTCAATTTCGGTTTGGATTCTCAGAGTTTGAATTCCATTCAGTCCCATGCTCCATCACGGTTGCCATGGACTGGTCCAGTTCCAGGTGATATTGCTGAAGTGGAGGCATATTGTAGGATCTTTAGGAGTTCTGAGAGGCTTCATTCTGCGTTAATGGATGCCTTGTGTAACCCTCTCACTGGTGAATGCAGTGTTTCCTACGAGGTTCTCTCGGATGAGAAACCGCTTCTAGAGGATAAAATAGTATCTGTCCTTGGATGCATTGTGGCCCTTGTGAATGGTGGGAGGCAGGATGTTCTTTCTGGAAGGTCTTCAATTGGGACTCCCTTTCGTTCGACAGAGGTTGGCATGATGGAGGATACGCTCCCCCCACTTGCCCTTTTCAGAAGTGAGATGAAGAAGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAACTATTTTATTCCCGGTGATGATCGGAGCTTGGATGTGTGGAGGAAACTTCAGAGACTGAAGAATGTGTGCTATGATTCTGGCTTTCCTCACGGGGAGGATTATCCGTCTCCTGAGATCTTTGCGAATTGGAGTCCTGTGTATTTATTCACTTCAAAAGAGGACATGGACTCCAAAGAATCTGAAGCAGCTTTTTGCATGGGCGGGCAGGTAACAGAGGAAGGCCTAAAGTGGTTACTGGATAAAGGATATAAAACTATCATAGATCTCAGAGAAGAGGATGTAAAAGATAACTTCTATCAAGCAGCTGTGTGTGATGCTATTTCATCTGGAAGTATCAAGTTGGTCAGAATCCCTGTTAAAGTTAGGACTGCACCTACGATGGAACAGGTTGAGAGGTTTGCATCATATGTTTCAGATTGCAGCAAAAGACCAATGTATCTTCATAGTAAGGAGGGAGTTTGGAGAACATCTGCCATGGTCTCCAGATGGAGGCAGTACATGACTCGCCCTGCATCACAGTTTTTTTCTAATCAAGCAGTTATTTCCAATGACATGTCATCATATTATACAATTGGATCTGGAAAGCTGCAGGACTCAATGATTGCCGAGGGATCCTCCCTGGAAAAAGATACTAATTTGCTGCAAGAGGGTTTGGGTGCAACACATGGTTCTGCTAGCAGATTTGACTCATGTTCCTCTTTAAAGAAGAATAATGAAAAAACACAAAGTAATGGAGCCTTAAGTGAACTTAGTCCTGATGATATTGCTTCATCACAAGCCACTGCTGCTACTGGGGAAGGATCTTTTCCAATTTTCTCCAGAAAAACTAGCCCTTTAGAAGCTCAAGTTCCTCCTTTTGATATCTTTTCCAAAAAAGAGATGTCCAAATTTTTGGGAAGTAGACAGATTCCAAAGCCCTCACATTTCAGTCATCAGGGTAAAAGATTGGAAGGCCTGCCAGATTCGAGGAATCCTGAACCTAAACTTGTGGATCCTGAAAAAAGTTCCAATGGGTCAGCTCATGTGGATTATCCATCTGGTAGCAATTGGAAGTTAGTAAATTTGAATAATTCCAGTTCTGTTAGGACAACAGTTAATGGATTTAGTGAAGGGGAAATGTATTACAGGAGTGATGCCAATTTCTCTACCATTGTGAACAATGATATTGATAATGTCAATACTAACTCTCAAAGGATTGGAGTTAATAAGGATAAGACTGGGTTAGCCTTATCTGATGAAGACTTGGGGCTCATTGAAGGGGACATGTGTGCCTCATCAACGGGGGTGGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTCTTAGTACGAACAGATGGATTTTCTTGTGCCAGAGAGAGGGTGAGTGAATCCTCATTGGCCTTTACTCATCCTAGCACCCAGCAACAGATGCTTATGTGGAAAACTACGCCAAAGACTGTGTTACTGTTGAAAAAGCCAGGAGAGCATCTCATGGAAGAAGCTAGAGAGGTTGCTTCTTTTCTCTATTACCAAGAGAAAATGAATGTTTTTGTGGAACCTGATGCGCATGATATATTTGCTAGAATTCCTGGGTTTGGATTTGTTCAGACCTTCTATACTCAGGATACATGTGATCTACATGAGAAAGTTGATTTTGTAGCATGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCAAATCTGTTCAGAAATGCTATTCCCCCTGTTGTGTCATTTAACCTTGGTTCCCTTGGTTTTCTGACTTCTCATAATTTTGAAGACTACAAGCAGGACTTACAACAAGTTATCCATGGTAATAGTACAAGAGATGGAGTGTACATCACTCTCAGAATGCGTCTCCGATGTGAAATTTTTCGTAAGGGTAAAGCTGTACCAGGGAAAGTATTTGATATTCTCAATGAAGTTGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATCGAATGTTATGAACATGGTAGACTTATAACCAAGGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACTGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCCTGCATGCTGTTTACCCCAATCTGTCCACATTCACTCTCATTTAGACCAGTTATACTTCCAGATTCTGCTCAACTTGAATTAAAGATTCCAGAGGATGCAAGAAGCAACGCCTGGGTTTCATTTGATGGAAAGAGAAGACAGCAACTTTCAAGAGGAGATTCAGTACGAATATCTATGAGTCAGCATCCACTTCCAACAGTTAACAAGTTTGACCAAACTGGTGATTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCCCTATAA 2961 0.4299 MLARSLCTCHMVFSVDRITPTFVSVFSGNARVLAFRFQLRRNTHLVTAQLSNSFSFNFGLDSQSLNSIQSHAPSRLPWTGPVPGDIAEVEAYCRIFRSSERLHSALMDALCNPLTGECSVSYEVLSDEKPLLEDKIVSVLGCIVALVNGGRQDVLSGRSSIGTPFRSTEVGMMEDTLPPLALFRSEMKKCCESLHVALENYFIPGDDRSLDVWRKLQRLKNVCYDSGFPHGEDYPSPEIFANWSPVYLFTSKEDMDSKESEAAFCMGGQVTEEGLKWLLDKGYKTIIDLREEDVKDNFYQAAVCDAISSGSIKLVRIPVKVRTAPTMEQVERFASYVSDCSKRPMYLHSKEGVWRTSAMVSRWRQYMTRPASQFFSNQAVISNDMSSYYTIGSGKLQDSMIAEGSSLEKDTNLLQEGLGATHGSASRFDSCSSLKKNNEKTQSNGALSELSPDDIASSQATAATGEGSFPIFSRKTSPLEAQVPPFDIFSKKEMSKFLGSRQIPKPSHFSHQGKRLEGLPDSRNPEPKLVDPEKSSNGSAHVDYPSGSNWKLVNLNNSSSVRTTVNGFSEGEMYYRSDANFSTIVNNDIDNVNTNSQRIGVNKDKTGLALSDEDLGLIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCARERVSESSLAFTHPSTQQQMLMWKTTPKTVLLLKKPGEHLMEEAREVASFLYYQEKMNVFVEPDAHDIFARIPGFGFVQTFYTQDTCDLHEKVDFVACLGGDGVILHASNLFRNAIPPVVSFNLGSLGFLTSHNFEDYKQDLQQVIHGNSTRDGVYITLRMRLRCEIFRKGKAVPGKVFDILNEVVVDRGSNPYLSKIECYEHGRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2054 986 Pfam ATP-NAD kinase C-terminal domain 833 959 - -
Gso4g2054 986 Gene3D - 813 953 IPR017437 GO:0003951|GO:0019674
Gso4g2054 986 MobiDBLite consensus disorder prediction 421 452 - -
Gso4g2054 986 Pfam ATP-NAD kinase N-terminal domain 716 799 IPR002504 GO:0003951|GO:0006741
Gso4g2054 986 PANTHER NAD KINASE 27 986 - -
Gso4g2054 986 MobiDBLite consensus disorder prediction 500 543 - -
Gso4g2054 986 Hamap NAD kinase [nadK]. 679 977 IPR002504 GO:0003951|GO:0006741
Gso4g2054 986 Gene3D - 668 978 IPR017438 -
Gso4g2054 986 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 265 368 IPR029021 -
Gso4g2054 986 Gene3D Protein tyrosine phosphatase superfamily 256 388 IPR029021 -
Gso4g2054 986 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 682 981 IPR016064 -
Gso4g2054 986 MobiDBLite consensus disorder prediction 510 530 - -
Gso4g2054 986 PANTHER NAD/NADH KINASE FAMILY PROTEIN 27 986 - -
Gso4g2054 986 MobiDBLite consensus disorder prediction 425 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2054 Gso-Chr4 50982438 50988934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2054 K00858 - gmx:100796381 1969.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2054 4 50982438 50988934 Gso4g2054 4 50982438 50988934 ECH