Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2050 ATGGCCACAAGTTGCTCCTACATGGTTTCCACCAAATTATCCATGCTAGGTTGGAGTGGAGGAAGAAGAAGAGAAGCCAGAAGCCGGAGAGCATTCTTGGTCTCAGCTCAACAACAAAGCGATGTTAAGGAAGCAGAGAGCTTGAAGGTAGAAGAGGAGCAAGAGCAGGAACAAATGCAAACTCAAACACCGAAGCCAAAAGGAACAACACCAAGGCCAGTGGAACCTCAGTTGAATGTGAAGAGCAAAAACATGCTGAGGGAATATGGAGGGCAGTGGCTGAGCTGCGCCACACGCCATGTGAGGATCTATGCTGCGTATATCGACCCGGTGACTTGTGAGTTTGATCAAACCCAGATGGATAAGCTCACCCTTATTCTTGATCCCACTGATGAGTTTGTGTGGAATACTGAGACTTGCAACATGGTTTATTCTTACTTCCAGGAGCTTGTTGATCACTACGAGGGCGCTCCATTGACAGAATACACACTTCGCCTGATTGGTTCAGACATAGAGCACTATATAAGAAAGATGTTATACGATGGGGCAATCAAGTATAACATGAATGCAAGGGTTCTGAATTTCAGCATGGGCAAGCCACGGATCATGTTCAACAACAATGATATCCAACCTGAAGATGCAACTGAGAAATGA 654 0.4572 MATSCSYMVSTKLSMLGWSGGRRREARSRRAFLVSAQQQSDVKEAESLKVEEEQEQEQMQTQTPKPKGTTPRPVEPQLNVKSKNMLREYGGQWLSCATRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTDEFVWNTETCNMVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGAIKYNMNARVLNFSMGKPRIMFNNNDIQPEDATEK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2050 217 MobiDBLite consensus disorder prediction 34 79 - -
Gso4g2050 217 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 214 IPR018922 GO:0016655
Gso4g2050 217 Coils Coil 35 62 - -
Gso4g2050 217 MobiDBLite consensus disorder prediction 44 58 - -
Gso4g2050 217 Pfam Cyanobacterial and plastid NDH-1 subunit M 94 202 IPR018922 GO:0016655
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2050 Gso-Chr4 50911183 50912854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2050 - - gmx:100794966 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2050 4 50911183 50912854 Gso4g2050 4 50911183 50912854 ECH
Gso4g2050 4 50911183 50912854 Gso6g1001 6 9678801 9680504 GST